| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0001 |
|---|
| Symbol | dnaA |
|---|
| ID | 6202426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 25 |
|---|
| End bp | 1356 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641701524 |
|---|
| Product | chromosomal replication initiation protein |
|---|
| Protein accession | YP_001828733 |
|---|
| Protein GI | 182680573 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0269853 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAT TGATGGAATC TTGGTCCCGT TGCCTGGAAC GTCTTGAAAC TGAATTTCCA
CCAGAAGATG TTCATACTTG GTTGAGACCT TTACAAGCTG ACCAACGCGG TGACAGTGTC
ATCCTTTACG CACCCAATAC CTTTATCATT GAACTAGTAG AAGAGCGATA CTTAGGGCGT
CTTCGAGAAT TGTTATCCTA TTTTTCAGGA ATACGTGAAG TAGTCCTTGC AATTGGCTCA
CGACCTAAAA CAACAGAACT AACCGTACCA GTAGATACTA CAGGACGTTT GTCTCAAACA
GTCCCATTTA ACGGAAATCT GGACACACAC TATAACTTTG ATAATTTTGT TGAGGGACGA
AGCAATCAAC TCGCTCGTGC TGCAGCTTGG CAAGCCGCAC AGAAACCGGG AGACCGTACT
CACAACCCTC TATTACTCTA TGGTGGGACT GGTTTGGGTA AAACCCATTT AATGTTTGCT
GCAGGTAACG TAATGCGGCA AGTAAACCCA ACTTATAAAG TCATGTATCT TCGTTCGGAA
CAATTTTTCA GCGCCATGAT AAGAGCGTTA CAAGACAAAA GTATGGACCA GTTTAAGCGT
CAGTTCCATC AAATTGACGC GCTATTGATT GATGACATTC AATTTTTTGC TGGAAAAGAT
CGTACTCAAG AAGAATTCTT TCATACTTTT AATGCTTTAT TCGACGGGAA ACAGCAAATT
ATTTTAACAT GTGATCGTTA TCCTAGAGAA GTTAATGGTC TAGAACCACG ATTAAAATCT
CGTTTAGCTT GGGGACTTTC CGTAGCGATC GATCCTCCTG ACTTTGAAAC CAGAGCTGCG
ATTGTATTGG CTAAAGCACG TGAACGTGGC GCTACGATTC CAGATGAGGT TGCATTCTTA
ATTGCAAAAA AAATGCACAG TAATGTCCGT GACTTAGAGG GTGCACTAAA TACCTTAGTA
GCACGTGCAA ACTTTACTGG GAGAGCTGTA ACTATTGAAT TCTCACAAGA GACCTTAAGA
GATTTATTGC GTGCACAGCA ACAAACAATT GGCATCCCTA ATATCCAAAA GATTGTAGCT
GATTATTATG GTTTACAAAT CAAAGATTTG CTTTCAAAAC GCCGTACTCG TTCATTAGCA
CGACCAAGAC AATTGGCAAT GGCATTAGCT AAAGAGCTGA CTGAGCATAG CTTGCCTGAA
ATTGGAGACG CTTTTGCAGG CCGAGATCAT ACAACAGTGT TGCATGCTTG CCGTCAAATC
AAGTTATTGA TGGAAACTGA AACCAAATTG CGAGAAGACT GGGATAAACT AATGCGAAAA
TTTAGTGAAT AA
|
|---|
| Protein sequence | MTTLMESWSR CLERLETEFP PEDVHTWLRP LQADQRGDSV ILYAPNTFII ELVEERYLGR
LRELLSYFSG IREVVLAIGS RPKTTELTVP VDTTGRLSQT VPFNGNLDTH YNFDNFVEGR
SNQLARAAAW QAAQKPGDRT HNPLLLYGGT GLGKTHLMFA AGNVMRQVNP TYKVMYLRSE
QFFSAMIRAL QDKSMDQFKR QFHQIDALLI DDIQFFAGKD RTQEEFFHTF NALFDGKQQI
ILTCDRYPRE VNGLEPRLKS RLAWGLSVAI DPPDFETRAA IVLAKARERG ATIPDEVAFL
IAKKMHSNVR DLEGALNTLV ARANFTGRAV TIEFSQETLR DLLRAQQQTI GIPNIQKIVA
DYYGLQIKDL LSKRRTRSLA RPRQLAMALA KELTEHSLPE IGDAFAGRDH TTVLHACRQI
KLLMETETKL REDWDKLMRK FSE
|
|---|
| |