Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4629 |
Symbol | |
ID | 6205504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5946417 |
End bp | 5948942 |
Gene Length | 2526 bp |
Protein Length | 841 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641694296 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001821499 |
Protein GI | 182416433 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCCTCCT CGACGCCCAG CCCGACCCCC AGCGGAGGTC CCGCGCCGGG GCCGTCTTCC GCCTCCCGCG TCGGAGCCCC GCGGTCGGCG TGGAGGCCCG ACCGGAAAAT CGCCCTGCTT TACGTCGCCT ACGTTCTGGC CCACGTCGGA TTTCACCTCT GCGCCCGCTT TTTCGAGGTC GATACCGGCG TCTCCGTTTG GTATCCGCCC GTCGGACTCG CGCTGGCGCT GGCGACGATG ACCGGCTGGC GCTGCGCGCC GCTCGTGCTG GCCGTCAATC TCTACTCCGC GCTGGTCCAG ACACCTGGCC CAATCACGTG GACCGACTGG GTACTACCCG GCCTCTTCAC CCTCATCTAT GTCGGCGCCG GCGGCGCGGT GCACCGCTGG TTCGGGCCGG TGCCACAACC CACGCGGCCC GCTCCCGCCG CCGCCTTGAT CGGCACTTAC CTCGCTGCGG TCGCGGTGGC CGCCGTTGCG GGCGCGGCGG TGGTCCTCGC CGCGGGCTAC ACGCCAGTCG AGCGCTTCGC CGTCCTGACG TTCCACTGGT GGATGGGCGA TCTCACCGGA ATGCTCACCG TCGTGCCGCT GTGCCTCGTG CACGTGGCGC CCCGCCTGTT CCAGCCGGCG GCTTCTTCGC CGCGCCGGTG GACGAGGCGG CAAATTTGGG AAATCGTGGC GCAGGCGTGC AGCCTCGTTG GCGCGCTGGT CGTCGTGCAC GGCTTCGGCT ACCTCCATCC GCACCAGGCG TATTATCTTT CGTTCGTGCC GCTGGTTTGG ATCTGCCTGC GGCACGGCCT GCCCGGCGCC ACGATTGCGG TGTTCGCCCT CACGATGGGC AGCCTGCTGT CGCTCAGTTT TACCCGCGCC CCGGCCGTGC TCGTGACGGA TCTGGTGCTG TTCGAAATCG CGCTCGCCGT CATCGGGCTC GGACTCGGCG CCACGGTGAC GCGCCGCGCC CGAGCCGAGA CCGACCGCTC GCGGCTGCTC GCCATCCTGG AGGCCTCACC GGATTTCGTG TGCACCGCGG CACTCGACGG TCGCGTGCTC TACCAGAACC TCGCGCTCCA GCGGCTGCGG GGCGACGCGC CCGGGCAACC GCCGGCTGAT CGGCAGCTCG TCGATCTCCA CTGCCCATGG GCCGCCGAAC GCATCACCCG CGAGGGAATC CCGATCGCGC TGGCGGAGGG CGCGTGGCAC GGCGAAACGG CGCTGCGGCT GCGCGACGGT GGCGAGATTC CCGTGCTCGA GCTGATCCTC GTCCATCGCG ACGATGCCGG CCGCGCGGTG ATGCTGTCGA GCGTGGCCCG CGACATCAGC AGCCAGAAGC AGGCCGAGCG GGCGCGGCTC GAGTCGGAGC GCAGCCTGTT GCAGGCGCAA AAGCTCGACA GCCTCCGGGT GCTCGCCGGT GGCATCGCGC ATGATTTCAA CAACCTGCTC ACCGTCGTGC TCGGCCACGC CACGATGACG CGGCTCGAGC TGGCTGCCGA CAGCCCGGCC GAGAAGGCGG TGCACCAGAT CGAGCTTGCC GCACTGCGCG CCGCCGATCT CTGCCGGCAG ATGCTGGCCT ATTCCGGGCG CAACCAACTC GCCACCGAAC CTCTCGATCT GACGACGATT GTCGAGGAAA CCGGCGACCT GCTTCGCGTC TCGATTTCGA AAAAGTGCCG GCTTCAGCTG GAGCTTTCCC GCGCGCTGCC TCCCGTCCAG GGCGATGCCA CCCAGCTCAG TCAGATCGCG ATGAATCTCG TGATCAACGC GTCGGATGCC AGCGAGGAAC GCGGCGGCCT GATCCTGCTT CGCACCGGCC TGTGCGACGC CGACGCCACG TATCTGGCGG ACGCCTGCTT CGTGCAGTCC CCCGCCCCGG GACCATATGT TTACCTCGAG GTGACGGACC ACGGCTGCGG CATGTCACCG GAAGTCCGGC GCCGGATTTT CGAGCCGTTT TTCACGACGA AATTCACCGG TCACGGACTG GGCCTCTCGG CCGTGCTCGG CATCGTCCGC GCGCACGGCG GCGGCATCAA GGTCGACAGT GCGCCCGGTC GCGGCACCAC GTTTCGCGTC CTGCTGCCCA TTGCCGCCGG GGCCGCGCGG CCGCGGCCGG ACAAACTCGC CGCCACCACC GCGTGGCGCG GTTCGGGCCG CGCGCTGGTG GTGGATGACG AGGAATCAGT CCGCGAGATC GCCTGCCGCA TGCTGCGACA TTTCGGCTTC GAGCCCATCG CCGCCGCCGA CGGCCGCGAG GCACTCGAGC TTTTCCGCGC CGCGCCGGGG GCGTTCGCCC TCGTGCTGCT CGATCTGTCG ATGCCGGTCA TGGACGGACG CGAAACCTTC GAGGAGATCT TCCGGCTGGA TCCGACCACG CCCGTGCTCC TGATGAGCGG CTACAACAAA ACCGGCGCGC CCGACTCGTT CGACGATCCG CGGCTGTCCG GCGTGGTGCA GAAGCCGTTC GAGACGGCGA CGCTGGGTCG GGCACTGCGC GACGCGTGGG ATAACGACCT GCGGCGGGTG GCCTGA
|
Protein sequence | MPSSTPSPTP SGGPAPGPSS ASRVGAPRSA WRPDRKIALL YVAYVLAHVG FHLCARFFEV DTGVSVWYPP VGLALALATM TGWRCAPLVL AVNLYSALVQ TPGPITWTDW VLPGLFTLIY VGAGGAVHRW FGPVPQPTRP APAAALIGTY LAAVAVAAVA GAAVVLAAGY TPVERFAVLT FHWWMGDLTG MLTVVPLCLV HVAPRLFQPA ASSPRRWTRR QIWEIVAQAC SLVGALVVVH GFGYLHPHQA YYLSFVPLVW ICLRHGLPGA TIAVFALTMG SLLSLSFTRA PAVLVTDLVL FEIALAVIGL GLGATVTRRA RAETDRSRLL AILEASPDFV CTAALDGRVL YQNLALQRLR GDAPGQPPAD RQLVDLHCPW AAERITREGI PIALAEGAWH GETALRLRDG GEIPVLELIL VHRDDAGRAV MLSSVARDIS SQKQAERARL ESERSLLQAQ KLDSLRVLAG GIAHDFNNLL TVVLGHATMT RLELAADSPA EKAVHQIELA ALRAADLCRQ MLAYSGRNQL ATEPLDLTTI VEETGDLLRV SISKKCRLQL ELSRALPPVQ GDATQLSQIA MNLVINASDA SEERGGLILL RTGLCDADAT YLADACFVQS PAPGPYVYLE VTDHGCGMSP EVRRRIFEPF FTTKFTGHGL GLSAVLGIVR AHGGGIKVDS APGRGTTFRV LLPIAAGAAR PRPDKLAATT AWRGSGRALV VDDEESVREI ACRMLRHFGF EPIAAADGRE ALELFRAAPG AFALVLLDLS MPVMDGRETF EEIFRLDPTT PVLLMSGYNK TGAPDSFDDP RLSGVVQKPF ETATLGRALR DAWDNDLRRV A
|
| |