Gene Oter_4629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4629 
Symbol 
ID6205504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5946417 
End bp5948942 
Gene Length2526 bp 
Protein Length841 aa 
Translation table11 
GC content69% 
IMG OID641694296 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_001821499 
Protein GI182416433 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCTCCT CGACGCCCAG CCCGACCCCC AGCGGAGGTC CCGCGCCGGG GCCGTCTTCC 
GCCTCCCGCG TCGGAGCCCC GCGGTCGGCG TGGAGGCCCG ACCGGAAAAT CGCCCTGCTT
TACGTCGCCT ACGTTCTGGC CCACGTCGGA TTTCACCTCT GCGCCCGCTT TTTCGAGGTC
GATACCGGCG TCTCCGTTTG GTATCCGCCC GTCGGACTCG CGCTGGCGCT GGCGACGATG
ACCGGCTGGC GCTGCGCGCC GCTCGTGCTG GCCGTCAATC TCTACTCCGC GCTGGTCCAG
ACACCTGGCC CAATCACGTG GACCGACTGG GTACTACCCG GCCTCTTCAC CCTCATCTAT
GTCGGCGCCG GCGGCGCGGT GCACCGCTGG TTCGGGCCGG TGCCACAACC CACGCGGCCC
GCTCCCGCCG CCGCCTTGAT CGGCACTTAC CTCGCTGCGG TCGCGGTGGC CGCCGTTGCG
GGCGCGGCGG TGGTCCTCGC CGCGGGCTAC ACGCCAGTCG AGCGCTTCGC CGTCCTGACG
TTCCACTGGT GGATGGGCGA TCTCACCGGA ATGCTCACCG TCGTGCCGCT GTGCCTCGTG
CACGTGGCGC CCCGCCTGTT CCAGCCGGCG GCTTCTTCGC CGCGCCGGTG GACGAGGCGG
CAAATTTGGG AAATCGTGGC GCAGGCGTGC AGCCTCGTTG GCGCGCTGGT CGTCGTGCAC
GGCTTCGGCT ACCTCCATCC GCACCAGGCG TATTATCTTT CGTTCGTGCC GCTGGTTTGG
ATCTGCCTGC GGCACGGCCT GCCCGGCGCC ACGATTGCGG TGTTCGCCCT CACGATGGGC
AGCCTGCTGT CGCTCAGTTT TACCCGCGCC CCGGCCGTGC TCGTGACGGA TCTGGTGCTG
TTCGAAATCG CGCTCGCCGT CATCGGGCTC GGACTCGGCG CCACGGTGAC GCGCCGCGCC
CGAGCCGAGA CCGACCGCTC GCGGCTGCTC GCCATCCTGG AGGCCTCACC GGATTTCGTG
TGCACCGCGG CACTCGACGG TCGCGTGCTC TACCAGAACC TCGCGCTCCA GCGGCTGCGG
GGCGACGCGC CCGGGCAACC GCCGGCTGAT CGGCAGCTCG TCGATCTCCA CTGCCCATGG
GCCGCCGAAC GCATCACCCG CGAGGGAATC CCGATCGCGC TGGCGGAGGG CGCGTGGCAC
GGCGAAACGG CGCTGCGGCT GCGCGACGGT GGCGAGATTC CCGTGCTCGA GCTGATCCTC
GTCCATCGCG ACGATGCCGG CCGCGCGGTG ATGCTGTCGA GCGTGGCCCG CGACATCAGC
AGCCAGAAGC AGGCCGAGCG GGCGCGGCTC GAGTCGGAGC GCAGCCTGTT GCAGGCGCAA
AAGCTCGACA GCCTCCGGGT GCTCGCCGGT GGCATCGCGC ATGATTTCAA CAACCTGCTC
ACCGTCGTGC TCGGCCACGC CACGATGACG CGGCTCGAGC TGGCTGCCGA CAGCCCGGCC
GAGAAGGCGG TGCACCAGAT CGAGCTTGCC GCACTGCGCG CCGCCGATCT CTGCCGGCAG
ATGCTGGCCT ATTCCGGGCG CAACCAACTC GCCACCGAAC CTCTCGATCT GACGACGATT
GTCGAGGAAA CCGGCGACCT GCTTCGCGTC TCGATTTCGA AAAAGTGCCG GCTTCAGCTG
GAGCTTTCCC GCGCGCTGCC TCCCGTCCAG GGCGATGCCA CCCAGCTCAG TCAGATCGCG
ATGAATCTCG TGATCAACGC GTCGGATGCC AGCGAGGAAC GCGGCGGCCT GATCCTGCTT
CGCACCGGCC TGTGCGACGC CGACGCCACG TATCTGGCGG ACGCCTGCTT CGTGCAGTCC
CCCGCCCCGG GACCATATGT TTACCTCGAG GTGACGGACC ACGGCTGCGG CATGTCACCG
GAAGTCCGGC GCCGGATTTT CGAGCCGTTT TTCACGACGA AATTCACCGG TCACGGACTG
GGCCTCTCGG CCGTGCTCGG CATCGTCCGC GCGCACGGCG GCGGCATCAA GGTCGACAGT
GCGCCCGGTC GCGGCACCAC GTTTCGCGTC CTGCTGCCCA TTGCCGCCGG GGCCGCGCGG
CCGCGGCCGG ACAAACTCGC CGCCACCACC GCGTGGCGCG GTTCGGGCCG CGCGCTGGTG
GTGGATGACG AGGAATCAGT CCGCGAGATC GCCTGCCGCA TGCTGCGACA TTTCGGCTTC
GAGCCCATCG CCGCCGCCGA CGGCCGCGAG GCACTCGAGC TTTTCCGCGC CGCGCCGGGG
GCGTTCGCCC TCGTGCTGCT CGATCTGTCG ATGCCGGTCA TGGACGGACG CGAAACCTTC
GAGGAGATCT TCCGGCTGGA TCCGACCACG CCCGTGCTCC TGATGAGCGG CTACAACAAA
ACCGGCGCGC CCGACTCGTT CGACGATCCG CGGCTGTCCG GCGTGGTGCA GAAGCCGTTC
GAGACGGCGA CGCTGGGTCG GGCACTGCGC GACGCGTGGG ATAACGACCT GCGGCGGGTG
GCCTGA
 
Protein sequence
MPSSTPSPTP SGGPAPGPSS ASRVGAPRSA WRPDRKIALL YVAYVLAHVG FHLCARFFEV 
DTGVSVWYPP VGLALALATM TGWRCAPLVL AVNLYSALVQ TPGPITWTDW VLPGLFTLIY
VGAGGAVHRW FGPVPQPTRP APAAALIGTY LAAVAVAAVA GAAVVLAAGY TPVERFAVLT
FHWWMGDLTG MLTVVPLCLV HVAPRLFQPA ASSPRRWTRR QIWEIVAQAC SLVGALVVVH
GFGYLHPHQA YYLSFVPLVW ICLRHGLPGA TIAVFALTMG SLLSLSFTRA PAVLVTDLVL
FEIALAVIGL GLGATVTRRA RAETDRSRLL AILEASPDFV CTAALDGRVL YQNLALQRLR
GDAPGQPPAD RQLVDLHCPW AAERITREGI PIALAEGAWH GETALRLRDG GEIPVLELIL
VHRDDAGRAV MLSSVARDIS SQKQAERARL ESERSLLQAQ KLDSLRVLAG GIAHDFNNLL
TVVLGHATMT RLELAADSPA EKAVHQIELA ALRAADLCRQ MLAYSGRNQL ATEPLDLTTI
VEETGDLLRV SISKKCRLQL ELSRALPPVQ GDATQLSQIA MNLVINASDA SEERGGLILL
RTGLCDADAT YLADACFVQS PAPGPYVYLE VTDHGCGMSP EVRRRIFEPF FTTKFTGHGL
GLSAVLGIVR AHGGGIKVDS APGRGTTFRV LLPIAAGAAR PRPDKLAATT AWRGSGRALV
VDDEESVREI ACRMLRHFGF EPIAAADGRE ALELFRAAPG AFALVLLDLS MPVMDGRETF
EEIFRLDPTT PVLLMSGYNK TGAPDSFDDP RLSGVVQKPF ETATLGRALR DAWDNDLRRV
A