Gene Oter_4627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4627 
Symbol 
ID6205927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5943338 
End bp5945953 
Gene Length2616 bp 
Protein Length871 aa 
Translation table11 
GC content66% 
IMG OID641694294 
ProductRecD/TraA family helicase 
Protein accessionYP_001821497 
Protein GI182416431 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01448] helicase, putative, RecD/TraA family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0750551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTCC CGCCCATGTC GAGTTACCGC GGGCATTTTT CCCCGTTCCG TTCACGGGCG 
AGACGCCCGT GCCACCGCCT TCGGCCGCGT TCCGCGCTTC CCTTCGGTGT GGCGCCCGGT
ATTCCGTCAC TATCCGCCGT GGCTTCCTCT CCCGCAGCAA CTCTCACCGG CGTCGTCGAG
CGCATTATCT TCCTCAACGA GGAGAATCAC TACACGATCG CGGAGTTCCG GCCGGACGCG
GACAAAAAGT CCGTGCCGAA GGAACGCCCG GAACCGGTGA CGATCGTCGG TCCACTGCCG
GGCGTCGAGT GCGGCGAAAC GCTGCATCTC ACCGGCGAGT GGACGCGCCA CGCGCAGCAC
GGCGCGCAGT TCAAGGTCCT CGGCTTCAAG AGCGAGCTAC CGTCCAGCGT CTATGGCATC
CGGAAATACC TCGGCAGCGG ACTCGTGCCC GGCATCGGCA AGGTCTACGC CAACAAGATC
GTCGACGCGT TCGGCACCGA CACGTTTCGC ATCCTGAGCG AAGAGTCCGG CCGGCTGCGG
GATGTCGACG GCATCGGCCG CAAACGCGCA ACCGCGATCA AGGCGGCGTG GGATGCGAAG
CGGACCGAGC GCGAGCTCTA CATTTTTCTG CAGACCTACG GAGTGACGCC CGGCCAGTGC
GTGAAGATCG CAAAGCACTT CGGCCCGTCC GCGAAAAACA TCCTCACGCA GGAACCGTAT
CGCGCCGCTC GCGAGATCGA CGGCATCGGC TTCAAGACCG CCGACCGGAT CGCGATCAAT
CTCGGCTTCG CCAACGACGC CGCGCCGCGG CTCGACGCCG GATTGATCTT CGCGCTCGAA
ACACTGCAGG AGGAAGGCCA CACCGCATTC GGCGAATCGG ACCTTTGCGA CTACGCCGCG
AATTTGTTGG AGACGGACTC GCGACTGATC TGCGCCCGGA TCGACGCTCT GGTCGAAGCA
AAGCAACTCG TCCGCCATGG CGGCTCAGGT GTAGCCGGGG TCGTTGACCC CGGCCATGGA
GACGTGACGC CCTCGTCGCG TCCCGCCCGC CGCGACGAGG GCGTCGCGGC TCCATCTGCT
AGCGGCCGCG TCAGTGTCGC CGCGGTCGCC GACCGCGGCC CGGGCTCAAC GAGCCCGGCT
ACACCCAACC GCACTTCTGG CTCTCAGCTC TCAGCTCTCA GCTCTAGACT CATTCAGCTC
CCGCACAACG ATCGCGCCGA ACAGAAGATC GCCGAAGTCG TGCAGCGTCT GACGCGCGTT
GCCAGCGGCC TGCCGCCGAT CAAGACCGAC GCGGCGGTCA CTTGGGCTGA GCAGAAAGCC
GGCTTCACAT TCCACGAGCT GCAGCGCCGC GCCGTGCGCG CCGCGCTCAC GAGCAAGTTC
AGCATTCTCA CCGGCGGACC CGGCACGGGC AAAACCACCA TCCTGCGCGC ACTCGTGGAA
ATTCTGAAGG CGAAGAAAGT CCGCGTGCAC CTCGCGGCGC CCACGGGTCG CGCCGCGCAG
CGACTCGCGG AAACCACGGG CGGCTACGCC TCGACCATCC ACCGGCTGCT CAAATGGGAT
CCCGCCGCGG GCGGTTTCAT CGCGAACGAA AGCACGCCAC TTTCCACCGA TTTCCTGATC
GTCGACGAAG CCTCGATGCT CGACACGCGG CTCGCTTCCG CGCTGTTACA GGCGGTGCCC
GCGCGCGCGC ACCTGCTACT CGTCGGCGAC ATCGACCAAC TCCCAAGCGT CGGCGCCGGC
AACGTGCTGA AGGACCTGAT CGTCGTGGCC GAAGGCTCCG CGCCGCATCC TCAACTCTCA
ACCCTCAACT CTCAACCCGC GGCGCTCCGC GCCGCGATTC CCGTCACCCG GCTCTCCGTC
GTCTATCGCC AGAAGGACCA CAGCGGCATC GTCAGCACGG CGCACGCGAT CAACTCCGGC
GACGCCTCGC TGCCACCCGC GTTCGGCGAG ATCGCCGACG TCCCGCCGTG GAGCGATCTC
GCGTTCATCA CCGCCGCCGA CGCGGAGGAC TGCCTCCGCA AAGTCATCCA GCTCTGCACC
GAGTTCGTCC CCCAGAAACT CCACTGGCCG AATCCGATCG CCGACGTGCA GGTGCTCGCG
CCGATGCACA AGGGCGTCGC CGGCGTCGCC AACCTTAACG TGCAGCTGCA GGCCGCGCTG
AATCCGCACG CCCGCGGCCT GCGCGCCGCG ACCGGCGAAT ACCGACCGGC CGACAAGGTC
ATTCAGCTCC GCAACAACTA CGACAAAAAC CTCTTCAACG GCGATATCGG TTCGGTCGTG
TCGGTCGACG CCGAGCACGG CACAATGGTG GCGGAGTTCG ACGGCGAGCA ACACACGTTC
GAACGCGGCG ACTTCAGCGA TCTCGCCCTC GCCTACACGA TCAGCATCCA TAAATCGCAA
GGCAGCGAGT ATCCCGTCGT CGTGATCCCT CTGTTGAAGG GCCACTTCAT GATGCTGCAG
CGGAATCTGA TCTACACGGC GATCACGCGG GGCCGCAAAA AGGTCTACCT CGTCGGTGAA
CCCGCCGCGT ACGCCATGGC CGTCCGCAAC AGCGAATCGA AGCAACGGCT GACCCACCTG
CGGGAGAAGA TCGTCGTGAG CAGCAGCCGC GCCTGA
 
Protein sequence
MGVPPMSSYR GHFSPFRSRA RRPCHRLRPR SALPFGVAPG IPSLSAVASS PAATLTGVVE 
RIIFLNEENH YTIAEFRPDA DKKSVPKERP EPVTIVGPLP GVECGETLHL TGEWTRHAQH
GAQFKVLGFK SELPSSVYGI RKYLGSGLVP GIGKVYANKI VDAFGTDTFR ILSEESGRLR
DVDGIGRKRA TAIKAAWDAK RTERELYIFL QTYGVTPGQC VKIAKHFGPS AKNILTQEPY
RAAREIDGIG FKTADRIAIN LGFANDAAPR LDAGLIFALE TLQEEGHTAF GESDLCDYAA
NLLETDSRLI CARIDALVEA KQLVRHGGSG VAGVVDPGHG DVTPSSRPAR RDEGVAAPSA
SGRVSVAAVA DRGPGSTSPA TPNRTSGSQL SALSSRLIQL PHNDRAEQKI AEVVQRLTRV
ASGLPPIKTD AAVTWAEQKA GFTFHELQRR AVRAALTSKF SILTGGPGTG KTTILRALVE
ILKAKKVRVH LAAPTGRAAQ RLAETTGGYA STIHRLLKWD PAAGGFIANE STPLSTDFLI
VDEASMLDTR LASALLQAVP ARAHLLLVGD IDQLPSVGAG NVLKDLIVVA EGSAPHPQLS
TLNSQPAALR AAIPVTRLSV VYRQKDHSGI VSTAHAINSG DASLPPAFGE IADVPPWSDL
AFITAADAED CLRKVIQLCT EFVPQKLHWP NPIADVQVLA PMHKGVAGVA NLNVQLQAAL
NPHARGLRAA TGEYRPADKV IQLRNNYDKN LFNGDIGSVV SVDAEHGTMV AEFDGEQHTF
ERGDFSDLAL AYTISIHKSQ GSEYPVVVIP LLKGHFMMLQ RNLIYTAITR GRKKVYLVGE
PAAYAMAVRN SESKQRLTHL REKIVVSSSR A