Gene Oter_4624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4624 
Symbol 
ID6205783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5940512 
End bp5941288 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content65% 
IMG OID641694291 
ProductABC transporter related 
Protein accessionYP_001821494 
Protein GI182416428 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACA CCGAAAGCGC ACCGACGCCG GCGATCGACG TGCAGGGGCT GCATTGCGCC 
TACGAAGGTC GGACGATCCT GAAGGACGTG AGCTTCCAGG TCCGGCGCGG CGAGGTGTTT
TTCGTGATCG GCGGCTCCGG TTGCGGCAAG AGCACGCTGT TGCGGAATCT GATCGGCATT
CAAACGCCGG TGGCCGGCTC GGTGACGTTT CTCGGCGAAT CGTTCACGAA GGCGCGGCCG
GAACGGCGGC AGGAACTGCT CCAGCGATTT GGCGTGCTCT ACCAAGGGGC GGCGTTGTGG
ACCTCGCTGA CGTTGCGGCA GAACGTTGAG CTACCGCTCG AGGAATACAC CACGCTCTCG
CGCCGCGAGC GCGAGGAGAT CGCCACGTTG AAGCTGGCGC AGGTGGGGCT CGCGGGCTCG
GAGGATTTTT ATCCGGCGGA GATCAGCGGC GGCATGAAGA AACGCGCCGG GCTCGCGCGC
TCGCTCGCAT TGGATCCGGC GATCCTGTTC CTCGACGAAC CGTCGGCGGG GCTTGATCCC
ATCACGTCGC GGAAGCTGGA CGATCTGGTC CTGCAGATTC GCGATCTGCT CGGCACGACG
ATGTTTGTCG TGTCGCACGA ACTGGCGTCG ATTTTCAGCA TCGCGGATCG CGTGATCATG
CTCGACCGCG AGCAGCAGGG AATCGTCGCC GAAGGTCAGC CGCGCGAGCT GGCGCGGAGC
AGCGGAGACC CGCGCGTACG CGAGTTCCTG CATCGCGGTG ACCTGCCCCC GACATGA
 
Protein sequence
MSDTESAPTP AIDVQGLHCA YEGRTILKDV SFQVRRGEVF FVIGGSGCGK STLLRNLIGI 
QTPVAGSVTF LGESFTKARP ERRQELLQRF GVLYQGAALW TSLTLRQNVE LPLEEYTTLS
RREREEIATL KLAQVGLAGS EDFYPAEISG GMKKRAGLAR SLALDPAILF LDEPSAGLDP
ITSRKLDDLV LQIRDLLGTT MFVVSHELAS IFSIADRVIM LDREQQGIVA EGQPRELARS
SGDPRVREFL HRGDLPPT