Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4624 |
Symbol | |
ID | 6205783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 5940512 |
End bp | 5941288 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641694291 |
Product | ABC transporter related |
Protein accession | YP_001821494 |
Protein GI | 182416428 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGACA CCGAAAGCGC ACCGACGCCG GCGATCGACG TGCAGGGGCT GCATTGCGCC TACGAAGGTC GGACGATCCT GAAGGACGTG AGCTTCCAGG TCCGGCGCGG CGAGGTGTTT TTCGTGATCG GCGGCTCCGG TTGCGGCAAG AGCACGCTGT TGCGGAATCT GATCGGCATT CAAACGCCGG TGGCCGGCTC GGTGACGTTT CTCGGCGAAT CGTTCACGAA GGCGCGGCCG GAACGGCGGC AGGAACTGCT CCAGCGATTT GGCGTGCTCT ACCAAGGGGC GGCGTTGTGG ACCTCGCTGA CGTTGCGGCA GAACGTTGAG CTACCGCTCG AGGAATACAC CACGCTCTCG CGCCGCGAGC GCGAGGAGAT CGCCACGTTG AAGCTGGCGC AGGTGGGGCT CGCGGGCTCG GAGGATTTTT ATCCGGCGGA GATCAGCGGC GGCATGAAGA AACGCGCCGG GCTCGCGCGC TCGCTCGCAT TGGATCCGGC GATCCTGTTC CTCGACGAAC CGTCGGCGGG GCTTGATCCC ATCACGTCGC GGAAGCTGGA CGATCTGGTC CTGCAGATTC GCGATCTGCT CGGCACGACG ATGTTTGTCG TGTCGCACGA ACTGGCGTCG ATTTTCAGCA TCGCGGATCG CGTGATCATG CTCGACCGCG AGCAGCAGGG AATCGTCGCC GAAGGTCAGC CGCGCGAGCT GGCGCGGAGC AGCGGAGACC CGCGCGTACG CGAGTTCCTG CATCGCGGTG ACCTGCCCCC GACATGA
|
Protein sequence | MSDTESAPTP AIDVQGLHCA YEGRTILKDV SFQVRRGEVF FVIGGSGCGK STLLRNLIGI QTPVAGSVTF LGESFTKARP ERRQELLQRF GVLYQGAALW TSLTLRQNVE LPLEEYTTLS RREREEIATL KLAQVGLAGS EDFYPAEISG GMKKRAGLAR SLALDPAILF LDEPSAGLDP ITSRKLDDLV LQIRDLLGTT MFVVSHELAS IFSIADRVIM LDREQQGIVA EGQPRELARS SGDPRVREFL HRGDLPPT
|
| |