Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4616 |
Symbol | |
ID | 6207919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 5929120 |
End bp | 5930346 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641694284 |
Product | immunoglobulin I-set domain-containing protein |
Protein accession | YP_001821487 |
Protein GI | 182416421 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAACT CCACCCGACG TTTTCCTCTC CTCTCCCCCC GGCCCTTGCC CCGCCGCGTT GTCCCCTTTG CGTTCGCCAG CTTTCTCGCG CTCACCACGT GGACCGTCCA AGCGGCGCCC TCGGCTCCGG TGATCGGCAG CTACACGGCA GCTGTAGTCA AACCGGCCGG CGGCAACGCC ACGCTGACCG TCTCGGCGTC GGGCGATCCG ACGCCCAAGT ATCAATGGCT CCGCGTGGGG ACCATGATCT CCGGCGCGAC GGCCTCCACG CTGACCGTCT CGGGACTCGA GCCCGGGGAT ACGGGGCTCT ACTCGGCGGT GGCGTCGAAC ACCGAAGGCT CCGCCTCGAT CGTTTCGATT GTCGGGCTGT CCACCGACCG CAAGGTCATT GGCTCCGGCA CGGAGCTGAC GCCGGTCGAT ATTCACCATC CCAACGGCAA CATCTTCGAC CAGGTGCTGG TGACCGGAGC GAGTGAGTCC ATCACCGCCG ATGCCGGGCA GATTACGCGT ACATCCTACA TCGATATCGA TGGCGACATC GTGCAGGTGG AATTCAGCGG GCCGGGAACG TTGTCACTGG TGCTGGCCTC CCCGACCGGG CCCGCCGTGG CGGAAAAATA CAATCAACCG ACGGTGAACT ACATGAAAGG CCATGCCGGC ATCGTCATCG CTGGCGCAAC CGAGAATACA CACGTGTCGG TATTCACCGT CGGTCGCGCG ACCGCCTTCG ATCCCAATGG CGGCTACGAC ATCACGAAGC CGATCAGCGC CACCAACAAT CCCGACAACA ACCACAGTCC GCTCTTCGAT GGACACAGCA CGACCACTTA CGATGGCGTC GCGGATCTGG CGTTCATCGC GATCATGAGC TCGAACCAGA AGTTCGGAAG TCTCCGCGCG GCGAATGTGA GTTTCTTTGC CTCCAAGGGG CATACGGGAA TCTACGCCCG CGGAGTGACA TTCACGGGGC CCGTGCGCGT CGGAGATATT TCCGCATTCG ACGCCGCGGA GCCGGTGCTG TATCTCGGCT CCGCCGCGGA CGTGAGCATC ACGGGCGGCG ATCTCTACCA GGACAACGGA AAGCCGGTGC AGGTGAACGG CATGGACCAG CTGAAGTTTG TCGCCGGCAC GGATTCCCAC GGGCATGCAA TCGCCGCGAA GCAGAACCGC GCCGTGTTGA TGCAGAACGG TCAGAACGTG ACGTCGAAGA TCGTGGTTAA TCCGTAA
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Protein sequence | MQNSTRRFPL LSPRPLPRRV VPFAFASFLA LTTWTVQAAP SAPVIGSYTA AVVKPAGGNA TLTVSASGDP TPKYQWLRVG TMISGATAST LTVSGLEPGD TGLYSAVASN TEGSASIVSI VGLSTDRKVI GSGTELTPVD IHHPNGNIFD QVLVTGASES ITADAGQITR TSYIDIDGDI VQVEFSGPGT LSLVLASPTG PAVAEKYNQP TVNYMKGHAG IVIAGATENT HVSVFTVGRA TAFDPNGGYD ITKPISATNN PDNNHSPLFD GHSTTTYDGV ADLAFIAIMS SNQKFGSLRA ANVSFFASKG HTGIYARGVT FTGPVRVGDI SAFDAAEPVL YLGSAADVSI TGGDLYQDNG KPVQVNGMDQ LKFVAGTDSH GHAIAAKQNR AVLMQNGQNV TSKIVVNP
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