| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4615 |
|---|
| Symbol | |
|---|
| ID | 6207228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 5928126 |
|---|
| End bp | 5929064 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641694283 |
|---|
| Product | 2-dehydropantoate 2-reductase |
|---|
| Protein accession | YP_001821486 |
|---|
| Protein GI | 182416420 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1893] Ketopantoate reductase |
|---|
| TIGRFAM ID | [TIGR00745] 2-dehydropantoate 2-reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTTGCC TCTTTTCTCG CATTGCCATC GTTGGCGCTG GCGCGATCGG CACGTACTAC
GGCGTGCGGT TGGGGCGTGC CGGCGCGGAC GTGCGGTTTC TGCTGCGGAG TGATCTCGAT
GCGGTCCGCC GGCGCGGCGC TATGGCGATC CACGAAAATG GCGCGACGCT CGAGCTGCGG
ACACCTGCGG TGTTTGTGCG CACCGAGGAG ATCGGAGCGG TCGACCTCGT GATCGTCACC
TTGAAGACCA CGGCCAACGA TCGGCTGGCG CAATTGCTCC CGCCGCTGAT CGGACCGGAC
ACGGTGGTGC TCACGCTGCA GAACGGACTG GGATCCGATG AGCTGATCGC GTCGCTGGTC
GGCGCAGAGC GCGTGCTGGG CGGGCTGGCG TTCATCGCGT CGACGCGGAC CGCACCGGGT
GAAGTAACGT GTTATCATCC GGGTTCGATT ACGCTGGGCG AGTTCAGCGG CGCGCCGCGG
GAACGCACGC GGATGCTCGC GGCGCAATTC AGTGCGGCGG GCGTGACGAT CAAGCTCGCG
GACAACCTGC TCGCGGCGCG TTGGCACAAG CTGGTCTGGA ACGTTCCCTT CAACGGGCTC
GCCGTCGCCG CGGGAGGAAT CACCACCGAC CGGATCTGCG CGGATCCGCG TCTGGCGGCG
CGCGTCCGCG CGCTGATGCG CGAAGTGCAG CACGCGGCGG CGGCCTTCGG CATCACGATT
GCGGACGAGT TTCTGCAACA GCAGTTCGAC GTGACACCGC CGATGGACGC TTACCGGCCG
TCGAGCCTGG TCGATTTTCT GGCCGGTCGC GAAGTGGAGA TCGAGGCAAT CTGGGGCGAG
CCGTTGCGGC GCGCGCAGGC CGCCGGAGCG GACGTGCCGG AGCTGGCGAA GCTCTACGAC
GAATTGCGCA CGGTGCCCCG CCGTTCGTCC GCGAATTAG
|
|---|
| Protein sequence | MSCLFSRIAI VGAGAIGTYY GVRLGRAGAD VRFLLRSDLD AVRRRGAMAI HENGATLELR
TPAVFVRTEE IGAVDLVIVT LKTTANDRLA QLLPPLIGPD TVVLTLQNGL GSDELIASLV
GAERVLGGLA FIASTRTAPG EVTCYHPGSI TLGEFSGAPR ERTRMLAAQF SAAGVTIKLA
DNLLAARWHK LVWNVPFNGL AVAAGGITTD RICADPRLAA RVRALMREVQ HAAAAFGITI
ADEFLQQQFD VTPPMDAYRP SSLVDFLAGR EVEIEAIWGE PLRRAQAAGA DVPELAKLYD
ELRTVPRRSS AN
|
|---|
| |