| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4609 |
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| Symbol | |
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| ID | 6207710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5916254 |
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| End bp | 5918560 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641694277 |
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| Product | OPT family oligopeptide transporter |
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| Protein accession | YP_001821480 |
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| Protein GI | 182416414 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCCC CTTCCTCTCC CCGCTTCGAG CCGTTCATTG CGCCCGAGAC GCAGATGCGC
GAGTTCACCC TGCGCGCGGT ACTCACGGGC GCGATTCTGG GCATCGTGTT CGGCGCGTCC
TCGCTCTACC TGGTCCTCAA GGTCGGACTC ACGGTCAGCG CGTCCATTCC GGTGGCCGTG
ATCTCGCTCG CGCTGTTCCG CGGACTTTCG AAGGTGGGCG TGCGCGACTC CACGATTTTG
GAGAACAACA TCACGCAGAC CGCCGGTTCC GCCGGCGAGT CGCTGGCGTT CGGCATCGGC
GCAACCATGC CGGCGATCAT GATCCTCGGG TTCGAACTCG AGCTGATGCG CGTGATGCTG
GTCGCGGTCC TTGGCGGACT GCTGGGAATC TTGATGATGA TCCCGCTGCG GCGCGCGCTG
ATCGTCAAGG AGCACGGCGT GTTGAAATAC CCCGAGGGGA CGGCGTGTGC GGCGGTCCTC
AAGGCCGGCG CCAACTCCGA CGATCGCGCC GCCGCCTCAT CCGCCGCGCA GGCGGACATC
CGCGCTGCCG CGGCCGCCGG TTTGGGCGCA TCGCCGGGCG CGAAGATCAT CTTTACCGGT
TTCGGCATCG GCCTGCTGTA CAAGACGCTC AATGCGGCGC TGAAGGGCTG GAAGGAAGTG
CCGGGCAAGA TCTTTGGCGC GCCCTTCAAC GGCGGATCCG TCAGTGCGGA AATTTCGCCC
GAGCTGCTGG GCGTGGGCTA CATCATCGGC CCGCGCGTGG CCGCGATCAT GTGCGCCGGC
GGCGCGCTGT CGTATCTGGT GCTGATCCCG CTGATCCACT TTTTCGGCGA TGGACTCAGC
GAGCCGCTGC TGCCGGGCAC CATGCCCATC CGCGAAATGC TGCCGAACCA GGTGCGCGCC
GCGTACATTC TCTACATCGG TGCGGGCGCC GTGACGGCGG GCGGCATCAT CAGCCTGATC
CGCGCGCTGC CGACGATCCT TCACAGCGTG AAAGCCGGGC TCGGCGACAT TGGCATCGGC
TCGGGCGCTG CCGCCGCGGC GGCCGGCGGG CCTCCGCGCA CGGATCGCGA CCTTTCGTTG
AAGTTCGTCG GCGGTGGCAT CGTAGTCCTC CTCACCGCGA TCATCCTGGC GCAGCCGCTG
CACATGAACC TGCTCGGTGC GTTGCTGATC CTGGCGTTCG GTTTTCTTTT CGTGACGGTC
TCCTCCCGGC TGACCGGTGA AATCGGTTCC TCCTCCAATC CGATCTCCGG CATGACGGTG
GCGACGCTGC TCTTCGTCTG CCTGATCTTC CTCATCGTGG GCTGGAACGG CGGGACGTAT
TACGTGACGG CGCTCTCCGT CGGCGCGATC GTGTGCATCG CCTCGTCGAA CGGCGGGACG
ACCTCGCAGG ATCTGAAGAC CGGCTTTCTG CTTGGCGCGA CGCCGCGCTA CCAGCAGCTC
GCGATCCTTG CCGGTGCCCT GTTTTCGGCG GTGTTGCTCG GGCCTATTCT GCTCCGCTTG
AACAGCGATG CGACGGTCTA CGTGCCGATT GCACAGGTGG CCCCGGCCGG CTTGCATGCG
AGCGCCGGTC AGCTCGATCC CGGTCGCCGC GAGGCGGTGC GCGGACCGCA GGCACGCGAC
GACTCCGCCA CCTATTCGGT CTGGCACAAG ACTGACACCG TGGGCGCCCC GGCCGGAAAA
TATCTCGTCA ACGACCAGGG CGACGCGGTG TGGCTGGTCG ACCCGGGCAT CAACGGCGTC
TACAGCGAAC GGCCGGACGG CTCGCAAGTC CGCAAGTTTG CCGCGCCGCA GGCGATGCTG
ATGTCGTACA TCATCAAGGG CATTCTCGAC CAGAAACTGC CCTGGGCATT GGTGCTGCTC
GGGTTCTTCA TCGCGATCAC GCTGCAGATG TCGTTCGTGC CGGCGCTGGC CTTTGCCGTC
GGCGTGTACC TGCCGCTATC GTCGTCGTCG CCGATCTTCA TTGGCGGCCT GATTCGCTGG
CTGGTGGATC GCAAGCTGCG GCAGCGCGAG TCGCACGCGA AACTCACGCC CGAGCAGTTT
GCCGAGGAGA GCGACAAGAG CCCGGGCGTG CTGCTCGCCT CCGGCTACAT CGCGGGCGGC
GCGATCGCAG GCATCGTGAT TGCGTTCATG GCTGCCGCGC TGAGCGACAT CGACAAGGCG
ATCACCGACT GGTCGCTGCT GCACAATCCG TTCTTCGAGG GGGCAAATGC CGACTGGCTG
TCGCTGATCC CGTTCGGCGC CCTGGTTGGA TTCCTGTACT TCGTGGCGCG CGAAAAGCTG
CTGGCGCCGA AGCGGCGCAG GTCGTAG
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| Protein sequence | MSSPSSPRFE PFIAPETQMR EFTLRAVLTG AILGIVFGAS SLYLVLKVGL TVSASIPVAV
ISLALFRGLS KVGVRDSTIL ENNITQTAGS AGESLAFGIG ATMPAIMILG FELELMRVML
VAVLGGLLGI LMMIPLRRAL IVKEHGVLKY PEGTACAAVL KAGANSDDRA AASSAAQADI
RAAAAAGLGA SPGAKIIFTG FGIGLLYKTL NAALKGWKEV PGKIFGAPFN GGSVSAEISP
ELLGVGYIIG PRVAAIMCAG GALSYLVLIP LIHFFGDGLS EPLLPGTMPI REMLPNQVRA
AYILYIGAGA VTAGGIISLI RALPTILHSV KAGLGDIGIG SGAAAAAAGG PPRTDRDLSL
KFVGGGIVVL LTAIILAQPL HMNLLGALLI LAFGFLFVTV SSRLTGEIGS SSNPISGMTV
ATLLFVCLIF LIVGWNGGTY YVTALSVGAI VCIASSNGGT TSQDLKTGFL LGATPRYQQL
AILAGALFSA VLLGPILLRL NSDATVYVPI AQVAPAGLHA SAGQLDPGRR EAVRGPQARD
DSATYSVWHK TDTVGAPAGK YLVNDQGDAV WLVDPGINGV YSERPDGSQV RKFAAPQAML
MSYIIKGILD QKLPWALVLL GFFIAITLQM SFVPALAFAV GVYLPLSSSS PIFIGGLIRW
LVDRKLRQRE SHAKLTPEQF AEESDKSPGV LLASGYIAGG AIAGIVIAFM AAALSDIDKA
ITDWSLLHNP FFEGANADWL SLIPFGALVG FLYFVAREKL LAPKRRRS
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