| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4573 |
|---|
| Symbol | |
|---|
| ID | 6205972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 5873403 |
|---|
| End bp | 5874590 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641694241 |
|---|
| Product | DNA polymerase III, subunits gamma and tau |
|---|
| Protein accession | YP_001821444 |
|---|
| Protein GI | 182416378 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.153993 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCCTCCA CCGGCTACCA AGTCATCGCC CGCAAGTGGC GGCCGCAGAC GTTCGACGAC
GTCGTCGGGC AGGATCATGT CGTGCGCACG CTGAAAAATG CGATCGCCCG CAATCGGATC
GCCCACGCCT ATCTGTTCGT GGGGCCGCGT GGCACGGGCA AGACCTCGAC GGCGCGGATT
TTCGCCAAGG CGCTGAACTG CACCGACGGT CCCAAGGCGG ATTTCGATCC CAACGATCCG
GCCTGCAAGG CGATCGCCGA GGGCTCGCAC CTCGACGTCA TCGAGATAGA CGGCGCCTCC
AACAACGGCG TCGACCAGGT GCGCGACCTG CGCGACACGG TGCAGTACGC GCCGGCGCAG
GGCCGCTACA AAGTCTACAT CATCGACGAG GTGCACATGC TCTCGGCGGC GGCGTTCAAC
GCGCTGCTCA AGACGCTCGA AGAGCCGCCG GGGCACGTGA AGTTCGTGTT CGCCACGACC
GATCCGCAGA AGGTGCTGCC GACGATCATT TCACGATGCC AGCGGTTCGA CCTGAAACCG
ATCCCGCCGG ACCTGATCAT CGCGCGGCTG AAACAGATTG CCGCGTCCGA GAAAATCACG
ATCAGCGCGG CGGCGCTGGA GTGCATCGCG CGGATGGCCG ACGGTGGGAT GCGCGATGCG
CAATCGATCC TCGACCAGAT GATTTCGTTC TGCGGTACCG ACATCTCGGA AGCGGACGTG
CTCGACGTTT ACGGACTCGT GTCGGCGGAA AAAATCGCCG AGCTCGCCGG CGCGCTCGCG
GCGGGGGATC ACCGGAAGAT CGTGGCGATC GTCGACGACT GCGACACGAA CGGCCGTGAC
CTGGTGCGGT TGCTCAGCGA TCTGCAGGCG TTCGTGCGCG CGGCGTTGCT CGACGCCATC
GCGCAAGGCG GCCGCAGCGC GAAGCTCGGC GGCGAGCCGA TGACGACCGA GCAGCTCACG
CGGATGCTCG ACGCGCTGCG TGAAGGCGAG GGCGCGGTGA AGCTCGGGCT CGCCGAGAAG
ATCAATTTCG AAGTCACGCT GCTGAAAGCG GTGGACGCGA GTCGCTCTCG CGCGATCGAC
AGCTTGATCA AGGAGCTGGC CGCGCTGGCG GAAGAAACGC CGGCAACCGA GGCCGGCGCG
CAGGGGTCCG GAGATCCCGA CCTGCAGAAC GAAAAAAAAA AGGGCTGA
|
|---|
| Protein sequence | MSSTGYQVIA RKWRPQTFDD VVGQDHVVRT LKNAIARNRI AHAYLFVGPR GTGKTSTARI
FAKALNCTDG PKADFDPNDP ACKAIAEGSH LDVIEIDGAS NNGVDQVRDL RDTVQYAPAQ
GRYKVYIIDE VHMLSAAAFN ALLKTLEEPP GHVKFVFATT DPQKVLPTII SRCQRFDLKP
IPPDLIIARL KQIAASEKIT ISAAALECIA RMADGGMRDA QSILDQMISF CGTDISEADV
LDVYGLVSAE KIAELAGALA AGDHRKIVAI VDDCDTNGRD LVRLLSDLQA FVRAALLDAI
AQGGRSAKLG GEPMTTEQLT RMLDALREGE GAVKLGLAEK INFEVTLLKA VDASRSRAID
SLIKELAALA EETPATEAGA QGSGDPDLQN EKKKG
|
|---|
| |