Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4538 |
Symbol | |
ID | 6208429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5839436 |
End bp | 5840308 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641694206 |
Product | hypothetical protein |
Protein accession | YP_001821409 |
Protein GI | 182416343 |
COG category | [S] Function unknown |
COG ID | [COG3828] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0275466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCC TCTGCGCCTT TCTGCTTCTC TCGATCGCCG CCGTCAGCGC CTCCGCAGCG CCGATCAAGG CGCTCATCAT CGACGGCCAG AACAACCACG AGTGGCAGGT CACCACGCCA CACCTGAAAT CGATCCTCGA GCAAACCGGG CTCTTCCACG TCGACGTTGC GACGACGCCG CCGAAGGGCG GTGATCTCAG CGGATTTCGG CCGACGTTTT CCGACTACGG TCTCGTGATT TCAAACTACA TGGGTGACGC GTGGCCCGCG GCCACGCAGG CGGCTTTCGT CGACTATGTG CGCGGCGGCG GCGGATTTGT TGTCGTCCAC TCGGCCGACA ATGCGTTTCC CGCATGGAAG GACTACAATG CGATCTGCGG GCTCGGTGGC TGGGAAGGCC GCAATGAGCA ATGGGGCCCG TATGTGTATT GGGACGGCAC CAAGATCGTC CGCGATCCGT CTCCGGGCCC CGGCGGTAGT CACGGCAACG TCCACGCGTT TCAGGTCGTG ATCCGCGAGC CGGATCATCC GATCACGCAC GGGCTGCCAA CGACGTGGAT GCACGCCGCC GACGAACTCT ACAACCGGCT GCGTGGCCCG GCCGAAAATC TGACCGTGCT GGCCACCGCT TACGACGATC CCGCCAACCG CGGTTCCGGC CGGCATGAGC CGATCCTCTT CACCGTCACC TACGGCCAAG GCCGGATTTT TCACACCCCA CTGGGTCACG TCCGCAAGGG TGACCTGACG GCGATGCGCT GCGTCGGGTT CATCGTCACG CTGCAACGCG GTGCCGAGTG GGCTGCGACC GGCCGGGTGA CCCAAGCCCT CCCCGCGGAC TTCCCGCAAG CCGAGACAGT TTCGCTCCGC TAA
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Protein sequence | MKTLCAFLLL SIAAVSASAA PIKALIIDGQ NNHEWQVTTP HLKSILEQTG LFHVDVATTP PKGGDLSGFR PTFSDYGLVI SNYMGDAWPA ATQAAFVDYV RGGGGFVVVH SADNAFPAWK DYNAICGLGG WEGRNEQWGP YVYWDGTKIV RDPSPGPGGS HGNVHAFQVV IREPDHPITH GLPTTWMHAA DELYNRLRGP AENLTVLATA YDDPANRGSG RHEPILFTVT YGQGRIFHTP LGHVRKGDLT AMRCVGFIVT LQRGAEWAAT GRVTQALPAD FPQAETVSLR
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