| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4514 |
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| Symbol | |
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| ID | 6204781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5803064 |
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| End bp | 5805430 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641694182 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_001821385 |
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| Protein GI | 182416319 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.47049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACGG GCGGGACGCC CGTGCCACAC GCAGCGCGAG CCACCCGCTC TCCACCGGCG
TCATCCGACG ACGACGACCG GTTGTTGGAA ATCACCGGCA CGGTGCAGGG CATCGGGTTT
CGCCCGTTTG TCGCGCGGCT GGCCAAAGAG CTGCGGATTC GCGGTTGGGT TCGCAACAAT
CCCCGCGGAG CCGCGCTGCG GATCGCTGGC GCTCCCGACC GCTTGGACGA GTTTCTCCTC
CGGCTGCGTG CCGAACTGCC CGCCGCCGGG AAAATCGACT CACTGGAGCA ACCTCCCGCG
GGCGTCCGCG CCGACCTGCC CCCTTGTCCC GCCGCCGGCT TCGAGATCAT CGCGAGTGCG
ACCACCGAAC CGCCTACGTC GGCCGTCACG CCCGACCTGG CGATCTGCGC GGACTGTTTG
GCCGAGCTCG GAAGTCCGCG CGATCGCCGC CACGGATATC CGTTTATCAA CTGCACGCAC
TGCGGTCCAC GCTACACGAT TCTTCGTGCG CTGCCCTACG ACCGACCGAA CACGACGATG
GCGGAGTTCG TGATGTGTCA CGACTGCGCC CGCGAATACG GCGATCCGCG CAACCGTCGC
CATCACGCGC AGCCGAACGC GTGTTCCGTT TGCGGACCGC ACGTGACGCT GGAGGATCCC
CCCGGAAAAA AACTCGCGGA GCGCGACGAG GCGATCGCAG CCGCGGCTGC ATCCCTGCTG
CACGGAAACA TTGTCGCGGT GAAAGGCATC GGCGGATTTC ATCTGCTGGC CGATGGCACC
AACGAAACCG CGGTCGCAGA GCTGCGCCGC CGCAAGCATC GCGAGGAGAA ACCGCTCGCC
GTCATGTTTC CCTCGCTCGC CGCGGTCCGC GAAATGGCCG AGCTCAGCGA GGAGGAGGAG
CGACAACTCA CGTCGGCCGC CGCGCCGATC GTGCTGGTGC GCCGTCGGCC CGGCGCGGCG
CTCGCCGTTT CGATCGCTCC CGGCAACCCG TGCGTTGGCG CGTTCCTGCC CTACACTCCG
CTGCACAAGC TGCTACTCGA CGCGTGTGCC CGGCCGCTGG TCGCCACCAG CGGCAACCTC
GCCGAGGAGC CGCTCTGCAC CGGGAACGTC GAAGCGCGCG AACGGCTCGG CCGGATCGCC
GACCTGTTCC TCACGCACAA CCGCGCCATC GCGCGACCGA TCGACGACTC TGTCATCCGC
GTGGCGCGCG ATGGGCCGGT CCTGCTCCGC CGAGCGCGGG GCTTCGCGCC GACCCCCTTG
CCCCTCCCCG CCGATTGCCG GTGCCGGCCG CCGCTACTGT GCGTGGGGGG AGAGCTGAAA
AGCACCATCG CCGTGACCAC GGACACCAAC CTCGTGCTCA GTCCGCATAT CGGCGACCTG
GAAAGTCCGC TCGCGCGCGC GGCCTTTCGC CACACGATCG ACCTGTTCCG CTCGCTGCAC
GAGCTCACCT TCCGCGCCGT CGGGTGCGAC GCGCATCCCG ATTACGCGTC GACGATTTTC
GCGGAATCCC TGGGGCTGCC GGTGGTTCGC GTGCAGCATC ATCTCGCGCA CCTGCTGGCT
TGTCTGCTGG AACACGGCGG CGGGCCAGAG CGCGTGCTTG GCGTGGCGTG GGACGGCACC
GGCTACGGCA GCGACGGCAC GATCTGGGGC GGCGAGTTCA TCGTCGTCGA TCGTCGCGCG
CACACCGCGC GGCGCGTCGG TCACCTTCGC CCCTTTCGGC TGCCCGGCGG CGAGGCCGCA
ATTCGGGCGC CGTGGCGGAC AGCGCTCGGT CTGCTCCACG CCCTCTCGCC TGATGCATCA
ACCGCGCTGA ACACCCTGCC CAACACCCCA GAAGCGCAGC AAGTCCGCGC GCTGCTCGAC
GGCGGCCGGC ACGCGCCGAT CACGACCAGC GCCGGCCGGC TGTTTGACGG CGTGGCCGCG
ATGCTCGGGC TTCGCCAGCA AGTCACTTTC GAGGGACAGG CCGCGATGGA CGTGGAAGCG
ATTGCTACCG ATGCAGAGCC CAACATCACC GGCTGGCCGA TGCCGATCGG GACATCCGAG
CAAACCGGCC GGCTCGAGCT CGACTGGCGC CCGGCGCTGG CCGCGCTCAC CCGCGAACTC
GCGCACACGC CGGTGCCGAC GCTGGCAGCG CGTTTTCACG CCACGCTCGC CGCAGGCATC
GCCGCGCTGG CCGAGCGTGT CGGCATCGAG GACGTCGTAC TGAGCGGCGG CTGTTTTCAA
AACGTCCGGT TGCTCGAGCT CACCACCGCC GCGCTGCAGG CGAAAGGTTT TCGCGTGCTG
CGACATCGCA TGCTGCCGCC CAACGACGGC GGCATCGCCG CCGGTCAGGC CCTCGGCGCG
TTGTGGGGGA TCACGTCGGT CGAATGA
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| Protein sequence | MITGGTPVPH AARATRSPPA SSDDDDRLLE ITGTVQGIGF RPFVARLAKE LRIRGWVRNN
PRGAALRIAG APDRLDEFLL RLRAELPAAG KIDSLEQPPA GVRADLPPCP AAGFEIIASA
TTEPPTSAVT PDLAICADCL AELGSPRDRR HGYPFINCTH CGPRYTILRA LPYDRPNTTM
AEFVMCHDCA REYGDPRNRR HHAQPNACSV CGPHVTLEDP PGKKLAERDE AIAAAAASLL
HGNIVAVKGI GGFHLLADGT NETAVAELRR RKHREEKPLA VMFPSLAAVR EMAELSEEEE
RQLTSAAAPI VLVRRRPGAA LAVSIAPGNP CVGAFLPYTP LHKLLLDACA RPLVATSGNL
AEEPLCTGNV EARERLGRIA DLFLTHNRAI ARPIDDSVIR VARDGPVLLR RARGFAPTPL
PLPADCRCRP PLLCVGGELK STIAVTTDTN LVLSPHIGDL ESPLARAAFR HTIDLFRSLH
ELTFRAVGCD AHPDYASTIF AESLGLPVVR VQHHLAHLLA CLLEHGGGPE RVLGVAWDGT
GYGSDGTIWG GEFIVVDRRA HTARRVGHLR PFRLPGGEAA IRAPWRTALG LLHALSPDAS
TALNTLPNTP EAQQVRALLD GGRHAPITTS AGRLFDGVAA MLGLRQQVTF EGQAAMDVEA
IATDAEPNIT GWPMPIGTSE QTGRLELDWR PALAALTREL AHTPVPTLAA RFHATLAAGI
AALAERVGIE DVVLSGGCFQ NVRLLELTTA ALQAKGFRVL RHRMLPPNDG GIAAGQALGA
LWGITSVE
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