| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4509 |
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| Symbol | |
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| ID | 6204587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5798788 |
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| End bp | 5799882 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641694177 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_001821380 |
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| Protein GI | 182416314 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.629717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.249783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATTCG TTGACGAGTA TCGCGACGCT CCCGCCGCAC ACCAACTCGC CGACGCGATC
GCGCGGCGCG TGACACGTCC GTGGACGCTG ATGGAAATCT GCGGGGGTCA AACCCACAGC
ATCCTCAAAT TTGGAATCGA TGAACTGCTG CCGCGCGCGG TGACGCTCGT GCACGGACCG
GGCTGCCCCG TGTGCGTCAC TCCGGTGGAA TTGATCGACG CAGCGATCGC TCTCGCCGGC
CGTCCCGGCG TCGTCCTGTG CTCCTTCGGC GACATGCTGC GCGTGCCCGG CTCGGGGTCG
GACCTGCTCA CCGCCCGCGC GCGCGGGGCC GAGGTGCGCA CCGTGTATTC GCCGCTCGAT
GCGGTGGCGC TGGCGCAGCG CGAACCCGCG CGCGAAGTGG TGTTCTTCGC GGTCGGCTTC
GAAACCACGG CGCCGGCCAA CGCCATGGCC GTTCTGCAAG CGCACCGCCT CAAGCTGCGA
AACTTCTCAC TGCTGATTTC GCACGTGCTG GTGCCGCCCG CGATTGCCGC GATTTTATCC
GCGCCCGACA ATTGCGTGCA GGGATTTCTC GCCGCCGGTC ATGTGTGCAC GGTGATGGGT
TTGGAAGAAT ATCATCCCCT TGCGGCGCAG TTCCACGTGC CGATCGTCGC CACGGGTTTT
GAACCGGTGG ACATTCTGCG CGGGGTGCTC GATTGCATCG AGCAACTCGA GAGCGGCCGC
GCCGAAGTGA CCAACGCCTA CGGTCGCGTC GTCCGTGAGG CCGGCAACCC GCACGCCCAA
GCAGTCATGC GCGAGGTCTT CATACCCTGC GATCGCAACT GGCGCGGGCT CGGGGTGATT
CCGCACAGCG GGCTCACACT CCGCGAGGAG TTCGCGTCGT TCGACGCGCT GCGGCGCTTC
GATCTCGCCG CGGTAGCCAC GGCCACCGCA GGCGAATGCA TCGCCGGCAC GATTCTGCGC
GGGCGCGCGA AGCCGCCGGC CTGCGCCGCA TTCGGCACGC GCTGCACTCC TGAGCATCCA
CTCGGCGCCC CGATGGTTTC CAGCGAGGGC GCCTGCGCGG CGTATTATCG CTACCGCGCG
CGTAGCTCAC CGTAA
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| Protein sequence | MKFVDEYRDA PAAHQLADAI ARRVTRPWTL MEICGGQTHS ILKFGIDELL PRAVTLVHGP
GCPVCVTPVE LIDAAIALAG RPGVVLCSFG DMLRVPGSGS DLLTARARGA EVRTVYSPLD
AVALAQREPA REVVFFAVGF ETTAPANAMA VLQAHRLKLR NFSLLISHVL VPPAIAAILS
APDNCVQGFL AAGHVCTVMG LEEYHPLAAQ FHVPIVATGF EPVDILRGVL DCIEQLESGR
AEVTNAYGRV VREAGNPHAQ AVMREVFIPC DRNWRGLGVI PHSGLTLREE FASFDALRRF
DLAAVATATA GECIAGTILR GRAKPPACAA FGTRCTPEHP LGAPMVSSEG ACAAYYRYRA
RSSP
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