Gene Oter_4497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4497 
Symbol 
ID6204561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5788068 
End bp5788838 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content59% 
IMG OID641694163 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001821368 
Protein GI182416302 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00119302 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.623088 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCACG GTGCTCAACT ACGGATTGTC ATTTTGAAAT GGGACCGCCT CTACGGTGAT 
CTGATTCGAC GCCACATTTG GGATGTTTGG CCCAACGCGG TCGTTTGCGT GTTCCAGCAT
GGAATCGACG CGCTGGCCGA TATTCAGGAT GCGGTGCCGG ACTTGTTCGT GACCGGCGTG
TCGATCGACG ACATGGATGG CCTCGAACAC TGCGAACCGT TCATTGAAAC GTCGCTGCCG
ATCCTCGTCG TGACGTCGCG ACCGAACACC CGCATGTTCG AGATGCTCCG TGGTATTCGC
TACGATGGCA TCTTCGACGG CTCTACGGAA GGAATGGATC ACCTGCCGGT GGCGCTGCGC
CATGTCGTCA ATCGCCGTCC CTACATCAGT CCATCGATGC TCCCTTTTTT GAAGGAGCGT
AAGAGCACCA CGCTGGAAGA TCTGACGGAA CGCGAGCAGG TGGTTCTCTC CGTGATTGGC
GACGGCTCCG ACAACAAACA GGCGAGCGAA CGGCTTGGCA TCTCGCGTTA CACGGTGTTG
ACGCACCGCG AATCGATCAT GCGCAAGCTC GACCTCCATC ATTCGAGAGA GCTGATGCAA
TATGCGCTGG TGCACGGCTA CGTGGTGATC ACAGCCAAGG GAATTTACCG CCCTGGCTTT
CAACGGCGGC TCGGCATTGG AGAGCGCCGA CATGGGCGTG AGTCGGGATC GAAGGCAGCC
GGTCGGGCGG ACGCGAACGG CCGCGCAGCG CCAGCGGTGT TCGATCAGTA G
 
Protein sequence
MSHGAQLRIV ILKWDRLYGD LIRRHIWDVW PNAVVCVFQH GIDALADIQD AVPDLFVTGV 
SIDDMDGLEH CEPFIETSLP ILVVTSRPNT RMFEMLRGIR YDGIFDGSTE GMDHLPVALR
HVVNRRPYIS PSMLPFLKER KSTTLEDLTE REQVVLSVIG DGSDNKQASE RLGISRYTVL
THRESIMRKL DLHHSRELMQ YALVHGYVVI TAKGIYRPGF QRRLGIGERR HGRESGSKAA
GRADANGRAA PAVFDQ