| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4481 |
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| Symbol | |
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| ID | 6205692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5773103 |
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| End bp | 5775826 |
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| Gene Length | 2724 bp |
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| Protein Length | 907 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641694147 |
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| Product | conjugative relaxase domain-containing protein |
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| Protein accession | YP_001821352 |
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| Protein GI | 182416286 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.569556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACGG TCGGAGTCAT TCGCAACGGC GCCACCTACC TGTCCCGCCA TCTCTGCAAA
AACGATTATT GGACGGAGGG AGAGAAAAGG ATCGAGGGCG AATGGATTGG GAAAGGCGCC
AAGGCACTGG GGCTCGAAGG TGGCGTTCAG ACCAAGGTAT TCGACGCACT CCGTCGAAAT
CGTCATCCGG AAACGGGAGA GCAACTGACG GCACGAGAGG ATAAGGACAG GGTCGCGTTC
TTCGACGTTC AGCTGTCGGC ACCGAAAGAC GTGAGCGTGC TCGCGATGCT CGGCGGCGAT
CAGCGCATCG TCGCCGCGTT TCACGACTCC GTGAAGATCG CGCTCGAGGA AATGGAGCGT
TTCGCGGCGG TCCGTGAACG CCGGGGCGAG TCGCGGTCGA GCGAGGATTT CCGGCTCACG
GGAAACTTCG CTGGCGCACT GTTCTTTCAC GACACGAGTC GCGATCTCGA TCCGCAATTG
CACGCACACG CAGTCCTATC GAATGCGACC TGGGACGCGG AGCGCGGCGA ATGGTTTGCG
CTGCAACCGG CGGAGATGTT GCGGGCGTCG GGGTATCTGC GTCAGGTGCT CTATCGGGAG
TTGGCAGGCC GGCTGCGGGA ACTCGGCTAC GAAACCTACG GAATGAACTC GACGGGCTTT
TCCGTGCGAG GCGTCGAACA CCTGCGCGAA CGGTTTTCGA AGCGCACACG GCATATTCAA
CAACTGGCGG AAGAGTTCGC GCAGAAGAAG GGACGCAAGC CGACCAAGCG CGAGGTTGAG
GTTCTTGTGC GTGAGTCCCG GGCGAACAAG CTGCCCAACG TGAGCACGCG CGAGGTGCGT
GCGCGCCAAC GCGCAGAGCT CAACCCGGAC GAAGCAGCCG CGCTTGCGGA CCTGGTGCGG
ACGGCGCGAG CAAAGGCACC CGGCCAGAGG ATATCGCACG GACAGGTCGT GACGGTGCTG
GAAGCGGCGT TGCGGCACGT ATTCGAGCGC AGCAGCGTTG TGCGCGAAGG CGAGGTGCTG
AACGCCGCGC TCGAACTCCA TCCTGATTTT TCCCGGTGGC GCGAGTTGCG GGAGGCGCTG
CAAGGCCGCA CGGATGCGAT CCGCAGCGAG GGCGAGATGA GCCTGCGGCC AATCCATCGC
GAAGAGACGG CGACCATTCG TCGTGTCGTC GAAGGCCGCA ACACGCGCTT CCCGCTCGGC
GACGCAACGC TTCTTCCGGA GCGATTGACG CGCGGCCAGC TCGCCGCGGC GCGAGCGTTG
CTCGCGAACA AGGATTTTCT GAGCGTGCTG GTTGGTGACG CCGGCACGGG CAAGACAACC
GTGCTCACGG CGATTCAGGA CGCGCATCGT GCCGCAGGTG GGCAACCGTT CCTCCCCCTG
ACTCCGACGA CGCGGGCACG CGAAGCTTTG GTCGACGCCG GATTCGAGCG AGCGGACACG
GTGCAGCGTT TCCTCGTGAG CGAAACGTTG CAGGCGGAGG CAGTGCGCCG GGTGTTGCTC
GTGGACGAGG CGGGACTCCT CTCCACGGAA CAGCTCGATC GTCTCACCCG CATTGCTCAG
GAACGGCGCG CCCGCGTGCT CCTGGTCGGC GACACGAAAC AGCATTACAG CGTCCAGCGC
GGCGACGCCA TGCGGAACGT GATCCGGAAT TCAGGGACGC CGGTCGTCCG GCTGTCCGAG
GTGTTGCGAC AGCGCGAAGA GAAGGATCGC CACTTCAGTC GGCTGCTCGC GGCGGGGAAT
GTGTCGGATG CTTTGCTCTA CGCGGAACGA CGCGGGATGA TGCGGGAGTT GGGCGATGAC
GAGACGTTGT TCACGAGCGC CGCCGAGCAC TACGCCGAAA ATGTGGCGAA GGGAACGGAG
ACGCTGGTCG TGATTCCGTT CTGGGAGGAT ATCGATCGTT TCAGCGTTCA CGCGCGGACG
GCGCTGCGGC GTCGCGGCCT GCTCGGGGAC GCGGAGGTCG TGCGCGAAGC GGTGCGTCCG
TTGACCTGGA CGGAAGAGCA GAAGGCGCAT TGGGACCAGT ATCGCGTCGG TGACCGGCTG
CTGTTCGTGC GAGACACGCG CTTCTTCAAG CGCGGGTCGG CGGCGGTGGT GAAAAAGATT
CTGCCAGACG GGCTGCACGT CGAGGGAGAG AATGAGCGGT ATGCGAAAAT CACCCGGAAG
CAGCGCGGGA GTTTCGATGT GGGCCGCGCG CAAATGTTGC CGGTGGCGGC CGGGGACCGG
CTGCTGATGC GTGGGCGGGA AGAAGAGCAA GGTTTCGCGA ATGGCGATTT CAGGGACGTG
GCCGCGGTCG ATCCCATCGC GAATCGCGTT TTCCTTTCGG ACGGCAAGGA ACTCCCGGCG
GATTTCCGCG CGTGGACCTA CGGACACGCA CTCACTTCCT ACCGTTCGCA AGGAAGCACG
GCCGAAGAAT CGTTGCTCGT GCTCGGCGAG GTCGCCGAAC AAGCGCTCAT GCGCCGGCAA
TTTTACGTCG GAAACACGCG ATACCGGGGC GCTCACCATA TCTACGTTTC ACACCGGGAT
GCGATCATTA CGCGGCTGGC GCGTCCTGAT CCGGGGCGTC AGCTCGCAAC AGAATTCGTG
CGGCGCCACC GAATCTTTCC TGCCGAGCGG ATCGCGATGG GACGATTGCA TCGCATGGGT
GCCCGCATGC GCGACGCATG GCTGAGCATA GCCGCCCGAT GGCAGGAAAC ACGTGAGGTC
GTTCGCGAGA AAATGGAGAT CTAG
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| Protein sequence | MITVGVIRNG ATYLSRHLCK NDYWTEGEKR IEGEWIGKGA KALGLEGGVQ TKVFDALRRN
RHPETGEQLT AREDKDRVAF FDVQLSAPKD VSVLAMLGGD QRIVAAFHDS VKIALEEMER
FAAVRERRGE SRSSEDFRLT GNFAGALFFH DTSRDLDPQL HAHAVLSNAT WDAERGEWFA
LQPAEMLRAS GYLRQVLYRE LAGRLRELGY ETYGMNSTGF SVRGVEHLRE RFSKRTRHIQ
QLAEEFAQKK GRKPTKREVE VLVRESRANK LPNVSTREVR ARQRAELNPD EAAALADLVR
TARAKAPGQR ISHGQVVTVL EAALRHVFER SSVVREGEVL NAALELHPDF SRWRELREAL
QGRTDAIRSE GEMSLRPIHR EETATIRRVV EGRNTRFPLG DATLLPERLT RGQLAAARAL
LANKDFLSVL VGDAGTGKTT VLTAIQDAHR AAGGQPFLPL TPTTRAREAL VDAGFERADT
VQRFLVSETL QAEAVRRVLL VDEAGLLSTE QLDRLTRIAQ ERRARVLLVG DTKQHYSVQR
GDAMRNVIRN SGTPVVRLSE VLRQREEKDR HFSRLLAAGN VSDALLYAER RGMMRELGDD
ETLFTSAAEH YAENVAKGTE TLVVIPFWED IDRFSVHART ALRRRGLLGD AEVVREAVRP
LTWTEEQKAH WDQYRVGDRL LFVRDTRFFK RGSAAVVKKI LPDGLHVEGE NERYAKITRK
QRGSFDVGRA QMLPVAAGDR LLMRGREEEQ GFANGDFRDV AAVDPIANRV FLSDGKELPA
DFRAWTYGHA LTSYRSQGST AEESLLVLGE VAEQALMRRQ FYVGNTRYRG AHHIYVSHRD
AIITRLARPD PGRQLATEFV RRHRIFPAER IAMGRLHRMG ARMRDAWLSI AARWQETREV
VREKMEI
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