Gene Oter_4478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4478 
Symbol 
ID6208549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5768772 
End bp5770724 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content58% 
IMG OID641694144 
Producthypothetical protein 
Protein accessionYP_001821349 
Protein GI182416283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.216888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATATCC GGCTCAATTC ACTCACGGTC ACGTGCAAGA AATCCCAGGA AGTCATTCCG 
TTTACCGATT TCACCTACTT CTACGGCCGC ATGGGTGCGG GCAAGTCATC CATTGTTCGG
ATGGTCGACT TTTGTTTCGG TGGCGACTTG GAGATGACCC CGGCATTGCA GAATGAACTG
GTCGGGGTCG GGCTCTCACT CACGATCGAA GGAAATCCGG TTAAGTTGGA GCGAAGTCCG
GATTCTGGAT CCGTGCGCGC CGAGTGGACC AAAGGGTCTG ATGCCCTCCA GCTGTTGGTT
CCCGCGCGCA CGCCGACTGA AAAGCCGATC TTCAGCAAAG ATATTCATGT GCTGTCCGAC
CTGCTTTTTT ACCTGGCGGG CAAAACCCCG CCCAAGGTCC GGCGCAGTAA AGTCGACGAA
GACTCTCCGC TTCAGCGCCT CAGTTTTCGG GACCTCTTCT GGTATTGTTA CCTCGACCAG
GACTCCGTCG ACAGCAGCTT CTTCAATTTG GAACTGGATA CCAATCCATT CAAAAAGCTG
AAGAGCCTGG ATGTGCTTCG CCTGCTCGTC GGCTTCCATC AAGCGGAAGT GTCGTCACTC
CAGGTCCGGC TGCAGGAAAT CAGAATCGAT AAAGATCGCA CGGAGGGTGC CCTCGCGGCG
ATGCGGGACG CGCTGGAAGA AACCCAGGTC GGAACGCCGC TGAAGATCGC CGCACGCCGC
GAAGAGCTGA ATCGCGAGAT CAAGGCAGCC GAGGCTTCGC TTGCCGCCAT TCGGGCACAG
GCGGCATCCC TGCGCTCGCA TGCGCTCAAC GACGCCCAAA ACAGAGCCCA TGCCTTGGCG
ATGGAACTCG ATGTCCTCGA CAACGCGCGG CGGGACGCGC GTGTCGCGAT TGAGAAAGAC
ATAGCACATC GCAACGAAAT GGAGTTTCTA GCCATTCGCT TCAAGCGGGC CACCAGCGCC
AGCGCCGTGT TGCGGGGGGT CCAGTTTAAG GCGTGCCCAA AATGCACCCA AGAGCTCCCG
CCACGAGCGG AGGGCGATTG CGCTGTGTGC GGCCAGAAAC ACCCGGCTGA CAACACGGCT
CCAGGAGTGG CAGTAGCAGC GGTGGATGCC GACACGGCGG GGCGGATCCG CGAGCTTGAC
GATCTCTTGG CGCGCCAAAC GGCTGCGCTG CGTGAGTTGG ATGAAGAGCG CATCGGCATG
GGCGAAGAGA AATCCCGGGT TGACGGTGAG ATCACGCGGC TCAGTGAAAA CTACGATTCG
GTCTATCTTT CCAACGCATT GGAGCTCGAG CGCCACCGCG CCTCACTCTC CCAGGAACTC
GTCAACTTCA ACCGATTCGA TCAGATTCTC CGCCGTCTCG CGCAGCTCGA CGACCATCTG
AAGTCATTGA TCGGCGAGGA AGCGACGACC CGCGCGAAGT TGAAGAGCGC GCAGATCGAA
GCCGAGCGAG ACACCAAAAA CCTCGACCGG CTGAAGCAGC TTTTCCTCGA CTCGCTACTG
CGCGCTCGGA TCCCGGGATT CGACAAGTCC GACGTGGTCG AAATGAAGGC TCCGCATTTT
CTCCCCGAGA TCACGGGAAT ATCGTCGGGC GACCTCGCGA TCACCTCGTT TACTAATCTC
GGCAGTGGGG GAAAAAAGAC TCTCTACAAA TGCTGTTTTG CCGTCGCGGT GCATCGGCTA
GCCGCCGAAA ATGGCGCGTT GCTGCCAACT CTCTTGATCA TCGATTCGCC AATGAAAAAT
ATCAGCGAAC GCGAAAACGT GGAGCAATTT AATGGGTTTT ACGGAATGCT CTACGAACTC
GCGCAAACCG AACTGAAGCA GACTCAATTT ATAATCGTCG ACAAGGAGCA CCAAGCTCCA
CCCAAGGACT TTGCTCGAAC GTTCTCAGAA CGACAAATGG CCCCAGATGA CGGCGAGCAT
CCTCCGCTGG TCAGCTATTA CCGCGGACAC TGA
 
Protein sequence
MNIRLNSLTV TCKKSQEVIP FTDFTYFYGR MGAGKSSIVR MVDFCFGGDL EMTPALQNEL 
VGVGLSLTIE GNPVKLERSP DSGSVRAEWT KGSDALQLLV PARTPTEKPI FSKDIHVLSD
LLFYLAGKTP PKVRRSKVDE DSPLQRLSFR DLFWYCYLDQ DSVDSSFFNL ELDTNPFKKL
KSLDVLRLLV GFHQAEVSSL QVRLQEIRID KDRTEGALAA MRDALEETQV GTPLKIAARR
EELNREIKAA EASLAAIRAQ AASLRSHALN DAQNRAHALA MELDVLDNAR RDARVAIEKD
IAHRNEMEFL AIRFKRATSA SAVLRGVQFK ACPKCTQELP PRAEGDCAVC GQKHPADNTA
PGVAVAAVDA DTAGRIRELD DLLARQTAAL RELDEERIGM GEEKSRVDGE ITRLSENYDS
VYLSNALELE RHRASLSQEL VNFNRFDQIL RRLAQLDDHL KSLIGEEATT RAKLKSAQIE
AERDTKNLDR LKQLFLDSLL RARIPGFDKS DVVEMKAPHF LPEITGISSG DLAITSFTNL
GSGGKKTLYK CCFAVAVHRL AAENGALLPT LLIIDSPMKN ISERENVEQF NGFYGMLYEL
AQTELKQTQF IIVDKEHQAP PKDFARTFSE RQMAPDDGEH PPLVSYYRGH