| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4431 |
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| Symbol | |
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| ID | 6204997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5720851 |
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| End bp | 5722902 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641694097 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001821302 |
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| Protein GI | 182416236 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.746059 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACTT CCCTCCGTTT CCTCTCCGTC ATTTTTCTCG CGCTGGCCTT GGCGGCTGGG
CTCGTGGCTG CCGAGCAGCT CTACACCTGC GGCATGCATC CGCAGATCAT CAAGAAGGAG
CCGGGCAACT GCCCGATCTG CGGCATGAAG CTCACGCCGA TCCGCGCGAA CACTGCGAAG
GCCAGCGGCT CGACCGCGGG CGGCGAGCGC AAGGTCAAAT ACTACAAATC GACCATGATC
CCCGGCGAGG TGAAAACCGC GCCCGGCAAA GATTCCATGG GCATGGACAT GGTGCCTGTT
TACGAAGGCG AGGACACTTC CGCCGAGAAC AACATTCAGA TTGATGCCGC GACGACCCAG
CGGATGAACC TAAAGACGGC ACTCGTCGAA CAAGGCCCCG TGCGCCGCGA GTTTCGCACC
GTTGGTTTGG TGGCCTACAA CGAAGAGGGG CTGCGCGACA TCACCACGAA GTATGAGGGG
TGGATAGAAA AACTGATGGT CAACACCACA TGGACGTTGG TGAAAGCCGG TGACCCGCTC
TTTGAAATCT ATTCGCCCGA CGTCTACAAC GCGCAGCTCA ATTACGTGCT GGCCCTGCGA
GCCGAAAAGG AACAGGCCGG ACCGCTGACG CGGGCGGCAT TGGCGCGACT GCAGCTTTTC
GATGTCTCGC CCGAGTTTAT CGCCGAGCTG AAACGCTCCG GTGAGCCGAG TCGCAGGATG
GTGTTCCACG CACCTACCGA TGGCTGGGTC ATCGAGAAGA TGGCGGTGGT CGGACAAATG
ATGAAGCCAG GCGAACGAAT TTATCGTCTT GCGGACCTCT CGTCAGTTTG GGTCGAGGCA
CAGATTTACG AGAAGGATCT GCCCTATCTC AGCAGCGGAC AGGACGCGAC TGTCCGCTCG
AGCTATGGTC CGCAGCGCAC GTTCGAAGGC ACCGTGCAGT TGCTTCTGCC TCAAGTCGAG
GCGCAGACGC GCACCGCGAC CGCGCGCATT GTGCTGCCAA ACCCGGAAGG CTTTCTGCGC
CCGGGTATGT TCGTCGACGT GAACTTCTCT GCCCAACTCG CCGCCAACGC GGTGCTCGTG
CCTGATATCG CGGTGCTCCG AAGCGGCGAG CGCAATACCG TTTTCATTGC GCTCGACGGC
GGCTTTTTCG AGGCACGCGA AATCAAGCTC GGGGCGCGCA GCAGCGGAAA CTTTTATGAG
GTCCTCAGCG GCCTGCGTGT TGGCGATCGC GTCGTCACGT CGGGGCAGTT CATGCTCGAT
TCCGAGAGCC AGCTCCGCGA AGCGATCCAG AAAATGCTAA AATCCGCCGA AGGCGTGCCG
ACGGCGAACG CCCAAGCGAC ACCCTCCGCG CCCGCAGCTC ACGAACATGC TGCGCCCGCG
GCGACGCCCC GTGAAGAGGG AGCGCTCGCG CCCGCTGCTC ATGAATCCGA GTCAGCCGTG
GCCATGCTGA GGCCGCTGGC CTTTGGTCTG GCCGATGCGG CGGCGGCTCT GGCGATCGAC
GACCTCGCCG GTTACCAGAA GCAACTGCCG GTGATTCGCG CGGCGCTCAC CAACTATTTC
AAGGCTGACG CGCACGCCGC GCACGGGCCA CTCGGTAAAT TCAAGGACGG CTTGTCGGTG
TCGACGGACC TTGCCGCTGC GCGCACGGAG TTCGAGCCGT TAAGCACGGC GGTCGCCGAC
CTCGCGCGCG AGCATCATCT CCATCACACG GAAGGGCTGC ACGTGTTCGA GTGCACGATG
GCACCGGTGA CCGGCACCGC GCGCTGGCTC CAGCGCAAAG CCGGCACCCA GAATCCGTTC
TTCGGGACGA AAATGTCCGG CTGCGGCGAC GAGATTACGG GCACTGAAGC GACGGGCGGA
ACCAGCGGCG GCATGGCCAT GGCGCTGCCG CCCGGGCATC CGCCGATCGA CCAAGTTTCC
GTAGCGGCCT ATCTCCGGTC GCAAACCACG GGCGCTGCGG TGGCCGCAAC TTCGGGCGAC
GGCAAGTGCG GCAGTTGCGG CATGAGCCAG GCCGAAATGG CGGCCGGCCT TTGCGAGCAC
GACAAGAAAT AG
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| Protein sequence | MKTSLRFLSV IFLALALAAG LVAAEQLYTC GMHPQIIKKE PGNCPICGMK LTPIRANTAK
ASGSTAGGER KVKYYKSTMI PGEVKTAPGK DSMGMDMVPV YEGEDTSAEN NIQIDAATTQ
RMNLKTALVE QGPVRREFRT VGLVAYNEEG LRDITTKYEG WIEKLMVNTT WTLVKAGDPL
FEIYSPDVYN AQLNYVLALR AEKEQAGPLT RAALARLQLF DVSPEFIAEL KRSGEPSRRM
VFHAPTDGWV IEKMAVVGQM MKPGERIYRL ADLSSVWVEA QIYEKDLPYL SSGQDATVRS
SYGPQRTFEG TVQLLLPQVE AQTRTATARI VLPNPEGFLR PGMFVDVNFS AQLAANAVLV
PDIAVLRSGE RNTVFIALDG GFFEAREIKL GARSSGNFYE VLSGLRVGDR VVTSGQFMLD
SESQLREAIQ KMLKSAEGVP TANAQATPSA PAAHEHAAPA ATPREEGALA PAAHESESAV
AMLRPLAFGL ADAAAALAID DLAGYQKQLP VIRAALTNYF KADAHAAHGP LGKFKDGLSV
STDLAAARTE FEPLSTAVAD LAREHHLHHT EGLHVFECTM APVTGTARWL QRKAGTQNPF
FGTKMSGCGD EITGTEATGG TSGGMAMALP PGHPPIDQVS VAAYLRSQTT GAAVAATSGD
GKCGSCGMSQ AEMAAGLCEH DKK
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