| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4407 |
|---|
| Symbol | |
|---|
| ID | 6208761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 5700503 |
|---|
| End bp | 5701489 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641694073 |
|---|
| Product | cysteine synthase A |
|---|
| Protein accession | YP_001821278 |
|---|
| Protein GI | 182416212 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.119856 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAA TACTCAACGA CATTACCGGA ACCATTGGCA ATACCCCTCT CGTGCGGCTC
AATCGCACCG CGGTCGCGCA CCGCGTCCAG GCTGAAGTCT TGCTGAAACT CGAATTTTTC
AATCCGCTCT CCAGCGTCAA GGATCGCATC GGCTGGGCGA TGATCGAAGA CGGGCTCGCG
TGCGGCCGGA TCACGAGCGA CACCGTCCTT ATCGAACCGA CCAGCGGCAA CACGGGCATC
GCGCTGGCGT TCGTCGCCGC GGCGAAGGGA ATTGAACTGG TTCTTACCAT GCCGGAGACG
ATGTCTCACG AGCGGCGAAA GATGCTGAAG ATCCTCGGGG CGCGCCTTGT GCTCACGGAG
GGAGCGAAAG GGATGAAAGG TGCGATCGCC AAGGCCGAGG AGCTCGCGAG CATAATCCCG
AACGCCGTCA TCCTTCAGCA GTTCGCGAAT CCGGCGAATC CGGCCGTTCA CCGCCGCACC
ACGGCCGAGG AGATCTGGCG CGATACCGAC GGCAAGGTGG ACATCGTGGT CGCCGGCGTC
GGCACCGGGG GCACGATCAC CGGCGTCGGC GAGGTGCTCA AAGCGCGCAA ACCTGGTATA
AGCGTGGTGG CGGTGGAACC CGACGGCTCG CCCGTGCTCT CCGGCGGCCA GCCCGGACCG
CACAAGCTCC AAGGCATCGG CGCCGGCTTC GTGCCCCAGG TTCTCAACAC GACGATCTAC
GATGAAATCA TTCGCGTGAA AGAGACCGAG GCGGGCTCGC TCTCTAAGCA GATCAACCAA
CTCGACGGCA TTCCGGTTGG AATCTCGTCG GGCGCCGTGG CGTGGGCGGC GCTGCAACTC
GCGCAGCGCC CGGAAAACAC GGGCAAGTTG ATCGTCGCGA TCATGCCGTC TTCGAGCGAA
CGCTATCTTT CGTCGTGGCT GTTCGGAGAC ATCAACACCG AGACCGACTC GCTCGACGAC
CTGTTGCCAG CCGGCGGCCC CGCGTGA
|
|---|
| Protein sequence | MTKILNDITG TIGNTPLVRL NRTAVAHRVQ AEVLLKLEFF NPLSSVKDRI GWAMIEDGLA
CGRITSDTVL IEPTSGNTGI ALAFVAAAKG IELVLTMPET MSHERRKMLK ILGARLVLTE
GAKGMKGAIA KAEELASIIP NAVILQQFAN PANPAVHRRT TAEEIWRDTD GKVDIVVAGV
GTGGTITGVG EVLKARKPGI SVVAVEPDGS PVLSGGQPGP HKLQGIGAGF VPQVLNTTIY
DEIIRVKETE AGSLSKQINQ LDGIPVGISS GAVAWAALQL AQRPENTGKL IVAIMPSSSE
RYLSSWLFGD INTETDSLDD LLPAGGPA
|
|---|
| |