Gene Oter_4400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4400 
Symbol 
ID6208894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5693911 
End bp5694684 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content61% 
IMG OID641694066 
Producthypothetical protein 
Protein accessionYP_001821271 
Protein GI182416205 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.420489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.36269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCC GCAAACGTGC AACGTTGATC ACCGCAGGCG CCGTTGGGCT GAGCAGTGCG 
GTGCCCGCTC TGTCTTCCGC CCCGGAAGTG AGCGTTACGT CGACGCTTGT ATCGGACTAC
GTCTTTCGGG GCCACCGGCT TGGCGGGGCT TCGGTTCTGC CCGCCGTGGA GGTAAGTGCA
GGTGGACTGA TCGCCGGGCT CTCTTCCAGA ATTCCAGTCG AAGGTCCGGG GCGGAACGAG
CCCGGCGCTG AGCTTGACCT TTATGCTTCG AAGGGTTTCA CACCGGCGGC GGCGGTGCGG
CTCACCGCCG GTTTCTCAGT TTATGTTTTT CGCGAAGTGG CTGTGAATTC CGGCTACCGC
CGCACGCTGT CCGAGCCGAA TCTTGCGCTC AGCTACACTC TTGCAGGCAT CAGGTTCACC
TCGTCGTGTT ACTACGATCT CTCCCGCAAG GGTCCGACGT TTGAGCTGGT GGCGGACGTT
GCGCTGGCGC TGACAAAACT CGGCACTGAA CTCGACCTCG CGGCGACCAT TGGGGGGTAT
CGGCTGCGCG AAGCTACTGA TGTCGGTACG TCCAGCACCA GAATCGGCGG CGGTTACTGG
TCGCTCGCCG CTTTCCTGCC CTATCAGATC ACGTCGGCGT CGAAGATCCA GATTGGCCTC
ACTTACTCCG CAGCGTTCGA CTCTTACATC CAGCAGGCTG CGACGCCGCG GACCACCCAT
CCTCTTTCCA CGCGGCGGGT TGCGCTCAAA CTCGGCTACT CCATTTCATT CTGA
 
Protein sequence
MTTRKRATLI TAGAVGLSSA VPALSSAPEV SVTSTLVSDY VFRGHRLGGA SVLPAVEVSA 
GGLIAGLSSR IPVEGPGRNE PGAELDLYAS KGFTPAAAVR LTAGFSVYVF REVAVNSGYR
RTLSEPNLAL SYTLAGIRFT SSCYYDLSRK GPTFELVADV ALALTKLGTE LDLAATIGGY
RLREATDVGT SSTRIGGGYW SLAAFLPYQI TSASKIQIGL TYSAAFDSYI QQAATPRTTH
PLSTRRVALK LGYSISF