Gene Oter_4399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4399 
Symbol 
ID6205230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5693192 
End bp5693713 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content59% 
IMG OID641694065 
Producthypothetical protein 
Protein accessionYP_001821270 
Protein GI182416204 
COG category[S] Function unknown 
COG ID[COG1839] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.444219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.557218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGA AGACCATTCG GATCGAAAAA CCGGACACCG CGAACTTGAT TTTCGGCCAG 
TGCCGTAGCG CGAAGACGCT GGAAGCCATT CACGTCGCCC TGGAGCAGAT TGGGTCCGGG
TTCCCGTTCG GAATCGCGTT CTGCGAGGCT TCCGGCAAAC GTCTCGTGCT TTGCGCAGGA
ACGGACGAGG TGATGATCGA ACTCGCGAAG AAGAACGCCG CCGCAATCGG CGCAGGGGAC
ACGTTTCTCG TCTTTTTCGG CGCGGTGCCC CCCTTCGGCG AAATCCTCGC CGCAATCAAG
TCCCTGCCCG ACGTGTGCGG CATCTATTGC GCCACCGCCA ATCCCCTAGA AGTCATTTTG
GCTGAAACGT CGCAAGGCCA CGGTGTGGTC GCCGTCGTGG ATGGCTACAG CCCTCAGGGA
ATCGAATCGC GTGAAGATAC TACGTGGCGA GAAAACTACC TTCATCATGT CACTGGATTC
GGCAAGCTGG GCGATCGGCC GCGGGAACCG AAGCCGAGTT GA
 
Protein sequence
MQLKTIRIEK PDTANLIFGQ CRSAKTLEAI HVALEQIGSG FPFGIAFCEA SGKRLVLCAG 
TDEVMIELAK KNAAAIGAGD TFLVFFGAVP PFGEILAAIK SLPDVCGIYC ATANPLEVIL
AETSQGHGVV AVVDGYSPQG IESREDTTWR ENYLHHVTGF GKLGDRPREP KPS