| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4385 |
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| Symbol | |
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| ID | 6208736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5678108 |
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| End bp | 5679118 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641694051 |
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| Product | integrase family protein |
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| Protein accession | YP_001821256 |
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| Protein GI | 182416190 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCCC CCGACCTTCC ATCTCTGATC CGCGGGTTTT TCGATCAGCA TCTCGTGTCC
CAGCGCGGAC TGAGTGGCCA CACGGTTCTG TCGTATCGCG ACACCTTCAA GCTCCTCCTC
AAGTTCGCTT CCGACGACTC GGGCAAGCGC GTGACCGAGC TCACCCTGGC CGATCTCACC
GCGGAGTTGG TGCACGGCTT TCTTCGCCAT CTCGAAGCGG ACCGGCGCAA CGGGATCGTC
ACCCGCAATC TTCGGCTGGC CGCGATCCAT TCTTTCTTCC GCTACCTCGC GATCGTTGAT
CCCCGGCACC TGACCCACGC CCACACGATC ATCGCGGTGC CGTTCAAACG GCGACCGCAT
CGCGTCGCGC AGTTTCTGGA GAAGGATGAG GTGCAGGAGA TATTTCGTCA GATCGATTCC
CGGACGCTGT TCGGTCAGCG CGACGACGCA CTCTTACGGA TGCTCTACAA CACCGGCATG
CGCGCGCAGG AGTTGGTTGA CCTCGACGTG CGGCACGTGC GTTTCACTCG ACCGTCGAAC
GTGCTCATCT TCGGCAAGGG CCGCAAGGAG CGCACCTGCC CGTTGTGGCC CGAGACGGTC
GCCGCGCTGA AGAGTTATCT CCAGCCTCGT TCGATCAAGT TCACCGACGC CGTGCCGCTG
TTTCTCAACA TCGACGGCAA CCGGCTGACG CGCTTCGGCG TTCGCTACAT TGTCAGTCAC
CGCATCAGTG AGGCGGCCCA GCGCTGCCCG ACCTTGCTCG CGCGGCGGAT CACTCCGCAC
ACGTGGCGCC ACACGACGGC GATGCATTTG CTGCAATCGA ACGTCGACCT CGCGATGATC
CGTTCCTGGC TCGGGCATGC ATCGATCGAG ACCACCAACA CCTACGTCGA GATCGATCTT
GAGATGAAGC GCAAGGCTCT CGCCTCCGCC GAGAAGATTC TCCCGAAGCC GAAGCACCCG
TCGTCATGGC GCGCCAACAC CGACGTGCTC GCCTGGCTGT CCAGCCTCTA A
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| Protein sequence | MSAPDLPSLI RGFFDQHLVS QRGLSGHTVL SYRDTFKLLL KFASDDSGKR VTELTLADLT
AELVHGFLRH LEADRRNGIV TRNLRLAAIH SFFRYLAIVD PRHLTHAHTI IAVPFKRRPH
RVAQFLEKDE VQEIFRQIDS RTLFGQRDDA LLRMLYNTGM RAQELVDLDV RHVRFTRPSN
VLIFGKGRKE RTCPLWPETV AALKSYLQPR SIKFTDAVPL FLNIDGNRLT RFGVRYIVSH
RISEAAQRCP TLLARRITPH TWRHTTAMHL LQSNVDLAMI RSWLGHASIE TTNTYVEIDL
EMKRKALASA EKILPKPKHP SSWRANTDVL AWLSSL
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