Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4358 |
Symbol | |
ID | 6207073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5653544 |
End bp | 5654536 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641694024 |
Product | integrase family protein |
Protein accession | YP_001821229 |
Protein GI | 182416163 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.922527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACGT GTTGTTTTCG CAGCGCGCTC GCGTTCCGGC TTCAGTCCTT CTGGGAGACG CGGGCCGCAT CGGGCCGCGG TCCTGTTCTC CTCAAGGTGC TGCGTTACCT CGACCGGTTT CTTATCGGTG AGCTGCAGCC CGGCGATACA ATCACGCGTG AGGTCACCGA GCGTTATTTC AAGAGCACCG AGCACTTGGC TCCGGGAACC CGGATCAACC GGATGTCGAT CCTCCGTCAG TTCTGCCTCT ATCAAAGCCA TTTCGATCCT CGCACGTGCA TCGTGCACCG GATGTTTTTG CCGCGGCGCA ATCGGCCGAT GCCGCACATC TACACGGTGG CCGAGGTCCG CCGGATCATG GCGGCGGCAC CGCCGGCCGA ACGTTCTCCG GACCCGCTGC GTCCCGTGGT GTTCGCAACC CTCGTCGGGT TCCTCTACGC CACCGGCCTG CGCGTTGGCG AGGCGGTGAA GCTCAATCTC GCTGACGTCG ATCTGTCACG CCGTCTTCTG CTCATTCGCC AAACCAAGTT CGGCAAGACT CGCTACGTGC CGCTGGCACC GTGCACCACC AAGCAGCTCG CGGCCTACGT GGCCCAGCGC CGCGCGGCCA GATTCTCGCA GGAGCCGACC GCGCCATTTT TCCCGTCATC CCTCGGTGGA CGCTATCACG TGCCGAGCTT CACGACGGTG TTTCTTCAAG TGTTGCGTCG GTTGGGGCTG CGCGGCCCGC CCGGCCAGCG CGGGCCGCGC ATCCACGACT TGCGGCATTC CTTTGCGGTG TCGCGGCTGA TGGCGTGGCA CAAGAGCGGC GATAATCTCT TCGCGAAGCT GCCCCTCCTG TCCACTTACC TCGGGCACAG CACGGTGACC GGGACCGAGA TCTATCTGCA CGCCACCGCC GAGCTGATGG AGTCGGTGGG CCAGCGTTTT CATGAGCACT TCGCGGTGCC ATCGGCCCGT CTCTTATGTC AGCCCCCGAC CTTCCATCTC TGA
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Protein sequence | MATCCFRSAL AFRLQSFWET RAASGRGPVL LKVLRYLDRF LIGELQPGDT ITREVTERYF KSTEHLAPGT RINRMSILRQ FCLYQSHFDP RTCIVHRMFL PRRNRPMPHI YTVAEVRRIM AAAPPAERSP DPLRPVVFAT LVGFLYATGL RVGEAVKLNL ADVDLSRRLL LIRQTKFGKT RYVPLAPCTT KQLAAYVAQR RAARFSQEPT APFFPSSLGG RYHVPSFTTV FLQVLRRLGL RGPPGQRGPR IHDLRHSFAV SRLMAWHKSG DNLFAKLPLL STYLGHSTVT GTEIYLHATA ELMESVGQRF HEHFAVPSAR LLCQPPTFHL
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