| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4345 |
|---|
| Symbol | |
|---|
| ID | 6206622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 5638706 |
|---|
| End bp | 5639701 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641694012 |
|---|
| Product | ribonuclease BN |
|---|
| Protein accession | YP_001821217 |
|---|
| Protein GI | 182416151 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1295] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0371842 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGA CGAAGCCAGA GACCTCAAGC CGCGCCAGCC ACCGGCGCGG GCAGACCGCG
CGCGGCCGGC GGGCGGACGC CCCCGGCGAC CTCCCCGCGC CGGGATGGCG CGATGTTTTG
CTTAGAACCA AGAATGAACT CGCGAAAGAC AATCTCTCGA TCGTCGCCGC GGGGGTGGCA
TTCTATTGCT TCATGGCGTT CGTGCCGATG CTGGGCGCCA TCGTGTCGAC CTATGGCCTG
GTCGCCGATC CCGTGCAGGT GAGCGAGCAC GCCGAGGCGC TGGCGCAGGT GGTGCCGGCT
GAGGTGATGC CTTTGCTGCG CGAACAGATG CAACGGCTCA CGTCCGCGGG TGAGGCAGCC
GGCATCGGCG CGCTGGTCAG TTTGCTCCTC GCGGTGTATG CCAGCGCCAA GGCCACCAAG
GCGTTGATCA CGGGATTGAA CATCGCCTAC GACGAAGAGG AGCGTCGGGG ATTCGTGCGG
CTGCAAGCGG TGGCCCTTGC GCTCACGCTG GGCGCGGTGC TCGGCGCGGT GCTGGCGCTC
GGACTGGTGG CGGTACTGCC ATCCGTGGCC GGACATTTGG GTTGGTCGGA CGCGGCGGGG
ACGGCGGTGA ACTGGCTGCG ATGGCCGCTG CTCGTGGGTG GGTTCATGCT CGGACTCGGA
GTGCTGTACC GGTTCGGACC AAGCCGGAAT CCGCCGCAAT GGCGATGGTT GAGCGCGGGA
GCGGTCGTGG CCACGGGCTT GTGGATCGTG GCGTCGCTCG GGTTTTCGTT TTATGTGAGC
ACCCTCGGCA ATTACGAGAA AACCTACGGT TCGCTGGGAG CGCTGGTGGT GTTTCTGCTT
TGGCTGTATC TGACCGGGTA TGTGGTTTTG CTCGGCGCCG AACTGAATGC CGAAATGGAA
CGTCAGACGG AGAAGGACAC GACTGCGGGC GAGCCGAAAC CGCTCGGCCA GCGCGATGCC
TATTCGGCGG ACACGGTCGG GCCCACGCCC GAATAG
|
|---|
| Protein sequence | MSTTKPETSS RASHRRGQTA RGRRADAPGD LPAPGWRDVL LRTKNELAKD NLSIVAAGVA
FYCFMAFVPM LGAIVSTYGL VADPVQVSEH AEALAQVVPA EVMPLLREQM QRLTSAGEAA
GIGALVSLLL AVYASAKATK ALITGLNIAY DEEERRGFVR LQAVALALTL GAVLGAVLAL
GLVAVLPSVA GHLGWSDAAG TAVNWLRWPL LVGGFMLGLG VLYRFGPSRN PPQWRWLSAG
AVVATGLWIV ASLGFSFYVS TLGNYEKTYG SLGALVVFLL WLYLTGYVVL LGAELNAEME
RQTEKDTTAG EPKPLGQRDA YSADTVGPTP E
|
|---|
| |