Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4344 |
Symbol | |
ID | 6205870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 5635260 |
End bp | 5638160 |
Gene Length | 2901 bp |
Protein Length | 966 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641694011 |
Product | hypothetical protein |
Protein accession | YP_001821216 |
Protein GI | 182416150 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0662196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGA CATCAACGCG TCGTCGCCTC GGATGGCTGT GGTTGCTCGT AGCGTGCGCC TGCCTGAGTG CCTTCACCCC GCAAGCGCAA GCCACCGTAG GGGACGAGCG GTTCGCGACG TTTGCACCGG CGCCAGGCGC ATTTCCGCTG GTGCACGAAG GTCGCGCGGC GACGCTGCTC GTCGACAGCC AGGATCACGC GGGCGTGTGG CGGGTCGCGG GCGACCTGCA GGCGGACATC GCGCGCGTGA GCGGCGTCAA AGCCGATCTG CGCCGCGACG ACTGGAACGC GCGCCCGGCC GCCGTGATCA TTGGCACGAT CGGCAAGAGC CGGATGATTG ATCAGCTGGT GCGGGAAAAG AAAATCGATG GGACACGGAT TGCCGGAAAA TGGGAGGCGT TTCTCGTGCA GGTCGTCGCG GCGCCGCTGC CCGGGATCGA CCAGGCGCTC GTGATCACCG GCAGCGACAA GCGGGGCACG ATTTATGGCG TCTACAGTGT CTCCGAGCAG ATCGGCGTTT CGCCGTGGTA TTGGTGGGCC GACGTGCCGG TGCAGAAACA CGCGTCGGTG TTCATCCGGC CGGTTCGGCA CATCAACGAG GGTCCGGCGG TGCAGTATCG CGGGATCTTC CTCAATGACG AGGCGCCCGC GCTGACCGGC TGGGTTTACG AGAAGTTCGG CAAGTTCGAC CACACGTTTT ATCAGCACGT GTTCGAGCTG ATCCTGCGGC TCCGGGGCAA CTACCTCTGG CCGGCGATGT GGCAGCCGCG GGCGTTCAAC GACGACGATC CGCTCAACCC ACAGCTGGCC GACGAGTATG GCATCGTCAT GGGCACGTCG CACCACGAGC CGCTGATGCG CGCGCACGCG GAGTGGGACC GTTACGGGAA GGGCCCTTGG AACTACGAAA AGAACATCGC GGTGCTGCGC GAGTTCTGGC GCGGCGGGCT GGAACGCGTG AAGGATAAGG AGAAGATCAT CTCCATCGGC ATGCGCGGCG ATGGCGACGA GCCGATGTCG GAACAGGAAA ACGTCGCGCT GCTCGAACGG ATCGTGGCGG ATCAGCGGCA GATCATCGGC GACGTGATGG GCCAAAAGCC ACAGGACGTT CCGCAGCTCT GGGCGCTCTA CAAGGAAGTG CAGGGGTACT ACGAGCGCGG GATGCGCGTG CCGGACGACG TGATCCTGCT TTGGTGCGAC GACAATTGGG GCAACATTCG CCGACTGCCG ACACCGGAGG AACAAAAGCG GGCCGGCGGC GCAGGCATCT ATTACCACTT CGATTACGTG GGCGGACCGC GAAACTACAA ATGGCTGAAC ACCATTCCGC TCACCAAAAT TTGGGAGCAG ATGCACCTCG CGTGGACGTA CCAGGCCAAC CGGATCTGGA TCGTGAACGT GGGCGACCTG AAGCCGATGG AGTTCCCGAT CGAGTTCTTC CTCGACTATG CGTGGAACCC GAGCCGCTGG CCCTACGAGC AGCTGCCGGC GTACACGCAG ACCTGGGCGG CGCGCGAGTT CGGGGCGGAG CACGCGGCGG AAGTGGCCGC GCTGATCGAC GGCTACACGA AACTCAACGG CCGGCGAAAG CCGGAGATGC TCGCGCCGGA CACATTGAGC ATGGTGAACT ACCGCGAGGC CGAGCGCGTG CTGACGGAAT GGCGTGATCT GACCGCCCGA GCGGAGCAGC TCAACCTAGC ACTGCCAGCG GAGTCGCGTG ATGCGTTCTA CCAGCTCGTG CTTTATCCCG TGAAGGCGAG CGGAGTGGTG CAGGAAATCC AGGTGGCCGC AGGCCTGAAC CGGCTCTACG CGCTGCAAGG GCGCGCGGCA GCCAACGCGC AGTCGGCCCG CGTGCGCGAG CTCTTCGACC TCGATCAGAA GCTGGTCGAC GATTACCACG AGCTCGGTGG TGGCCGCTGG AATCATATGA TGGACCAGAG CAACATGGGC TACACTTACT GGCAGACGCC CAACCTCGAG GTGGCGCCCG CCGTCAGCGA AGTCCGGCCC TACGCCGAGG CGTCTCCGGC GATCGCGATC GAAGGTTCAG AAAAATCGTG GTCCTCGTAC GGGGCCGGTC GCGCCGTGCT GCCTCCCCTG CACGTGGTGG CCGGCGGCAC GCGCTGGATC GAGGTGTTCA ATCGTGGACT GAAACCTTTC GAGTACAAAG TCAGCGCGGA TCAGTCGTGG GTCACGCTCA CGCCTGCGAG CGGTGAGGTG ACTGACCTGG TACGCGTCGA GGTCGGTGTA GACTGGAAAG CCGCGCCGCG CGGCGATGCC AAGGCGACGC TCACCGTCGT GGCGAACAGC GAGACATTTG CGGTCGATCT GCCGGTGGAG AATCCCGATC TCACGGGCGT GAACGGATTT CTCGAGTCGG ACCGCCACAT TGCGATCGAA GCGCCGCATT TTGCGCGGGC GATCGGCGCG GGCGAGATCC AGTGGAAGAC GCTGCCGGAT TTCGGCCGCA CGCTGGGCGG CGTGACGGTG ATGCCGGTCA CGGCTGCGAA GCAGGCGCCG GGCGGCAACT CGCCGCGGCT CGAATACGAC GTAGTGACGA GCTCCCTTGG TGAGGTCACC GTGGAGCTGC ACTGCGCGCC CTCGCTGGAT TTCCAGCCGG GCTACGGGCT GCAGTTCGCC GTTTCCTTCG ATGATGAGCA GCCCCAGGTG GTGAATCTCG ACACGTGGGC GACGCTGCAG ACTTGGGAAA AGGCCGTAGG CGACGGCGTG CGCAAGGTCA CCACCCGGCA CAAGCTGGAG ACACGCGGTC AGCACGTGCT GAAGTTCTGG ATGATCACTC CCGGCGTGGT GCTCGAGCGC GTGATCATCG ATGCCGGCGG GGTGCGGCCG AGCTATCTTG GGCCGGTCGA GAGCCCGCGG GTGGGCGAGC CAGTGCAGTA G
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Protein sequence | MNKTSTRRRL GWLWLLVACA CLSAFTPQAQ ATVGDERFAT FAPAPGAFPL VHEGRAATLL VDSQDHAGVW RVAGDLQADI ARVSGVKADL RRDDWNARPA AVIIGTIGKS RMIDQLVREK KIDGTRIAGK WEAFLVQVVA APLPGIDQAL VITGSDKRGT IYGVYSVSEQ IGVSPWYWWA DVPVQKHASV FIRPVRHINE GPAVQYRGIF LNDEAPALTG WVYEKFGKFD HTFYQHVFEL ILRLRGNYLW PAMWQPRAFN DDDPLNPQLA DEYGIVMGTS HHEPLMRAHA EWDRYGKGPW NYEKNIAVLR EFWRGGLERV KDKEKIISIG MRGDGDEPMS EQENVALLER IVADQRQIIG DVMGQKPQDV PQLWALYKEV QGYYERGMRV PDDVILLWCD DNWGNIRRLP TPEEQKRAGG AGIYYHFDYV GGPRNYKWLN TIPLTKIWEQ MHLAWTYQAN RIWIVNVGDL KPMEFPIEFF LDYAWNPSRW PYEQLPAYTQ TWAAREFGAE HAAEVAALID GYTKLNGRRK PEMLAPDTLS MVNYREAERV LTEWRDLTAR AEQLNLALPA ESRDAFYQLV LYPVKASGVV QEIQVAAGLN RLYALQGRAA ANAQSARVRE LFDLDQKLVD DYHELGGGRW NHMMDQSNMG YTYWQTPNLE VAPAVSEVRP YAEASPAIAI EGSEKSWSSY GAGRAVLPPL HVVAGGTRWI EVFNRGLKPF EYKVSADQSW VTLTPASGEV TDLVRVEVGV DWKAAPRGDA KATLTVVANS ETFAVDLPVE NPDLTGVNGF LESDRHIAIE APHFARAIGA GEIQWKTLPD FGRTLGGVTV MPVTAAKQAP GGNSPRLEYD VVTSSLGEVT VELHCAPSLD FQPGYGLQFA VSFDDEQPQV VNLDTWATLQ TWEKAVGDGV RKVTTRHKLE TRGQHVLKFW MITPGVVLER VIIDAGGVRP SYLGPVESPR VGEPVQ
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