| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4326 |
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| Symbol | |
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| ID | 6205947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5610673 |
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| End bp | 5613045 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641693993 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001821198 |
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| Protein GI | 182416132 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGT CCGCTGTTTT GCCGGATTTC AGCTCCTGCC GAGGGCTGCG TTGGGCCGCG
GGCGGGCTGC TCTTGCTGAC CCTGACGCTG CTGGCCTATG CGCCGGCGCT GCGCGGCGGG
TTGCTGTGGG ACGATGACGG ACACCTCACG CGGCCGGAGC TGCGCAGTGT GAGCGGTCTC
ATGCGGATCT GGACCGACGT CGGCGCGACG CAGCAATATT ATCCGTTGCT GCATTCAGGG
TTCTGGCTCG AACACCGGCT GTGGGGCGAG TCGGTGACCG GCTATCATCT GATGAACGTG
GTCCTGCACA CGCTGGCGGC GTTGCTGGTG GTCGCGATCG TTCGCCGGCT CTTCGGCGCG
CGGGAAAACG CGACGGCGTG GCTGGCCGGA GCGCTTTTTG CGCTGCATCC GGTCGGCGTG
GAGTCGGTGG CGTGGATCTC GGAGCAGAAG AACACGCTTT CCGCGGTGTT CTACCTCGCC
GCGGCGCTGG TGTTTTTGAA GTGGTATTCC GGGAACGGGA CTCCGGCGGC TGCGTCGCGT
TCATCTGATG TAGCCGGGGG CGGTGACCCC GGCGCCGGCC TCAGCGAGGC CGGCTACATG
CCGATGTCCA CGGGAGAGCA GGGCCGCCAC CGGCTGCTTT CGTTCGGGTA TTTCCTCGCG
TCGTTCCTCT TCCTTTGCGC GCTGCTGACC AAGACAGTCA CCGCCACGCT GCCGGCTGCG
TTGATGGTCG TGCTCTGGTG GCGGCGCGGG CGGCTCGGCT GGCGGCGCGA CGTGCTGCCG
CTGGTGCCGT GGTTGGCGGC CGGAGTCACC GCGGGGCTGT TCACCGCGTG GGTCGAACGG
ACGCACATCG GCGCGCGCGG CGATGCGTTC GCGCTGGATT TTTTCGAGCG CGGGCTCGTG
GCCGGCCGCG CGATTCTGTT CTACCTTGGG AAACTGCTCT GGCCGACGGA GCTCGTTTTC
ATCTATCCGC GGTGGACGAT CGATGCTGGC AACGCATGGC AGTGGGTTTT CCCGCTGGCA
GTGCTCGCGC TGCTGATCGG ACTCATCGCA CTGGCGCGCC GCTACCGCGG TCCGCTCGCG
GCGTTTTTGT TTTTCGCCGG CACCTTGTTT CCGGCGCTCG GTTTTTTCGA CGTTTACCCG
TTTCTCTATT CCTACGTCGC GGATCATTTC GCTTATCTCG CGAGTCTCGG CGTGATTGTG
CCGGCGGCGT TCGGATTTGT GCTGGCCGGC CGCCGGCTGC CGCGGAGGGC TCGCGCGATC
GCGCCGATAG CTGCGACGGT CCTGCTCCTG ACGCTCGCCG CGGCGACGTG GCGGCAGAGC
GGCCACTATC GCGATGCGGA AACGCTGTGG CGGGCGACGC TCGCTCGGAA TCCGGGATCG
TCGATGGCGC ACAACAATCT CGGCGAGATC CTCGCGTCCC GGCCGGAGCG GAACGCGGAA
GCGATCGAGC ATTTTTGCGC GGCGGCTCAG GCCGACCCGC AGAATGCGCC TGCGTTGAAC
AATCTCGGCT TGGCGTTGGC CAAAGATCCG ACGCGGATGG CGGAGGCGAT CGCGAGCTAC
GAGCAGGCGA TCCGAGTGCA GCCGGAGCTG ATCAATCCGC GCAACAATCT CGGCGTGTTG
CTGACGTCGA TGCCGGGACG ACTCGATGAC GGCATTACCC ACCTGCGCGA AGCGGCGAGG
ATGGATCCGT CGTCCGCCGG TGTGCGCGAC AATCTCGGCG TCGCGTTGCT GCGCGCCGGT
CGGTCGGCCG AAGCGGCGGA GGAGTTTGCG GCGGCGGTGA GTCTGCAGCC GGACGCGGCC
GCGTTGCGCA ACCGGCTCGG CGTGGCGCTC GCGAATGTGC CGGGCCGCGA AGCCGAGGCG
CTGGCGGAGT TTCGCACGGC CGTGGAGCTC GATCCGAACT CGGCGGAAGC TCGTATGAAT
CTCGCCAGGG CGCTCGCATC GCAACCAGAG CACGGCGCAG AAGCGATCGA GCAGTTGGAG
GCAGCGCTCC GGATCGCACC AACGCTGGGC GAAGCGCACG GGCTGCTCGG CCGGATCTTG
CTGACGATCC CGGAGCGTTT GCGCGAGGCC ACCGAGCACC TGCAGCAAGC GGTGGCCGTG
CAGCCGGAGT CGGCGGAGCT GCGGCAGGCA TTCGGCGTCG CGCTGCTCCG CGATCCGGCG
CGCACGCCCG ATGCGATCCG CGAGCTGGAA GCGGCCGTGC GGCTTGCGCC GGACATGATG
GAGGCGCACT ACGCGTTGGG CGTGGCTCTC TCCGGGGCGC CCGCGCGGCA GGCGGACGCA
CGGCGTCATT TTCGACGGAC GCTGGAGCTG CAGCCCGATT TCGGGCCCGC GCGGCAGGCG
CTCGCGGAAC TCGAAGCGAC GCGCAACGAT TGA
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| Protein sequence | MKPSAVLPDF SSCRGLRWAA GGLLLLTLTL LAYAPALRGG LLWDDDGHLT RPELRSVSGL
MRIWTDVGAT QQYYPLLHSG FWLEHRLWGE SVTGYHLMNV VLHTLAALLV VAIVRRLFGA
RENATAWLAG ALFALHPVGV ESVAWISEQK NTLSAVFYLA AALVFLKWYS GNGTPAAASR
SSDVAGGGDP GAGLSEAGYM PMSTGEQGRH RLLSFGYFLA SFLFLCALLT KTVTATLPAA
LMVVLWWRRG RLGWRRDVLP LVPWLAAGVT AGLFTAWVER THIGARGDAF ALDFFERGLV
AGRAILFYLG KLLWPTELVF IYPRWTIDAG NAWQWVFPLA VLALLIGLIA LARRYRGPLA
AFLFFAGTLF PALGFFDVYP FLYSYVADHF AYLASLGVIV PAAFGFVLAG RRLPRRARAI
APIAATVLLL TLAAATWRQS GHYRDAETLW RATLARNPGS SMAHNNLGEI LASRPERNAE
AIEHFCAAAQ ADPQNAPALN NLGLALAKDP TRMAEAIASY EQAIRVQPEL INPRNNLGVL
LTSMPGRLDD GITHLREAAR MDPSSAGVRD NLGVALLRAG RSAEAAEEFA AAVSLQPDAA
ALRNRLGVAL ANVPGREAEA LAEFRTAVEL DPNSAEARMN LARALASQPE HGAEAIEQLE
AALRIAPTLG EAHGLLGRIL LTIPERLREA TEHLQQAVAV QPESAELRQA FGVALLRDPA
RTPDAIRELE AAVRLAPDMM EAHYALGVAL SGAPARQADA RRHFRRTLEL QPDFGPARQA
LAELEATRND
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