Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4315 |
Symbol | |
ID | 6205860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5596210 |
End bp | 5597547 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641693982 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001821187 |
Protein GI | 182416121 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3405] Endoglucanase Y |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTTG TCCTGCGAAA GCCTGCGAAC GACTGCTGCG GCGCTCGGCA TCGAGCTGAT GTAGCCGGGG TCGGTGACCC CGGCCCGGGC TCAGCGAGCC CGGCTACAAA CGTATCCCCG CCCCGGTTTG TCGCGTGGGC CGCGGCGTTC GCCGCCTTGC TCGTCTCGTC CCTTGCTGCC GCGCCCGCGC CGCGCAACCT TTTCGCCGAA CTCCTCGGCA GATCCGACGC CGAAATCACC GCCAAGATCG ACGCCGGCTG GCAGCAGTTG TTCTACGGCA GCGATACCGA GGAGCGGCTC TATTATCCCG TCGATCCGGA CCTCGCCTAT CTCGCCGACA TCAACAACGG CGACGTCCGC TCCGAAGGCA TGTCCTACGG CATGATGCTC GCGGTGCAGA TAGATCGTCG CGCCGAGTTC GACCGGCTCT ATCGCTGGGC CCGAAAGTAC ATGCTGCACA CCGACAGTCC GCGCCGGGGC TATTTCGCGT GGCAGGTTTC TTTCGACGGC CGTCAGATCG ATCCCGGCTC CGCTTCCGAT GGCGAGGAGT GGATCGCGAC CGCGCTGCTG CTCGCGGCCG AGCGCTGGGG TTCTTCTGAT GCTGGCTCTT TCAACTACCT CGCCGACGCC CAGGCGCTGC TGCACGAGAT GCTGCACAAG CCGACCGAGG GCAACATCAC CGCGATCTTC TCGCGCGAGG AAAAGCAGGT CGTGTTCGCG CCGACGCTCG CCGGCTCCCA GTTCACCGAT CCTTCTTATC ATTTGCCGGC CTTCTACGAA GTGTGGGCAC GCCACGCCGA CTCGCCGGAA GACCGCGCGT TCTGGCGCGA CGCCACGCAA ACCAGCCGTG CGTTTTTCCA TCGCGCCGCG CATCCGCAGA CCGGCTTGAT GCCCGAATAC GCACATTTCG ACGGCCGGCC CTACACCGGC TTCGGCGCCG AGCGTGGCGA CTTCCGCTAC GACGCCTGGC GGATCCTCGC CAACGTCGCG TTCGATCACG CGCACTTCGC CGCGGATCCC TGGCAGGTCG AGCAGAGCAA CCGCATCCTG CGTTTCCTCT CTTCGCATCA GCCCGCGATT CCCAACCAGT TCACGCTCGA CGGCCGGCCG CTCTCGACCG ACGTCAACTC GACCGGTCTC ATGGCCATGG CCGCGGTGGC CGGCCTCGCC GCCGAACCTG AGCTCGCGCG ACCCTTCGTG CAATTCCTCT GGGACGCTCC GATCCCCCGC GGCCAGTATC GCTACTACGA CGGCGTGCTC TATCAGCTCG CCCTGCTGCA GGTCAGCGGC CGCTTCCAGC TCTCGTTCCA CCTCACCGCA CCCACCACTT CCAAATAG
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Protein sequence | MTFVLRKPAN DCCGARHRAD VAGVGDPGPG SASPATNVSP PRFVAWAAAF AALLVSSLAA APAPRNLFAE LLGRSDAEIT AKIDAGWQQL FYGSDTEERL YYPVDPDLAY LADINNGDVR SEGMSYGMML AVQIDRRAEF DRLYRWARKY MLHTDSPRRG YFAWQVSFDG RQIDPGSASD GEEWIATALL LAAERWGSSD AGSFNYLADA QALLHEMLHK PTEGNITAIF SREEKQVVFA PTLAGSQFTD PSYHLPAFYE VWARHADSPE DRAFWRDATQ TSRAFFHRAA HPQTGLMPEY AHFDGRPYTG FGAERGDFRY DAWRILANVA FDHAHFAADP WQVEQSNRIL RFLSSHQPAI PNQFTLDGRP LSTDVNSTGL MAMAAVAGLA AEPELARPFV QFLWDAPIPR GQYRYYDGVL YQLALLQVSG RFQLSFHLTA PTTSK
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