| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4308 |
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| Symbol | |
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| ID | 6208558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5585850 |
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| End bp | 5586770 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641693975 |
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| Product | DNA polymerase LigD polymerase subunit |
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| Protein accession | YP_001821180 |
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| Protein GI | 182416114 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02778] DNA polymerase LigD, polymerase domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCACGA AAACCGAACT CGTCGTCGCG GGCACGCGGC TGATGGTGAG CAATCTCGAC
AAGGTGATGT ATCCGAAAAC GGGCTTCACC AAGGGCAACG TGATCGACTA CTACGTGCGC
GTGGCCGACG TGTTGCTACC GCATCTGAAG AACCGACCGA TCACGTTGAA GCGCTATCCC
GATGGCGTGG CGGGATTCTT TTTCTATGAA AAGCAGTGTC CGCCCCACCG GCCGAAATGG
GTGAAGACCG CGACGGTGCC GCGCGGCAAG CGCGAGGGTG AGATCCACTA TTGCGTGATG
AACGACCTGC CGGCGCTGGT CTGGGCGGCG AATCTCGCGG ATCTCGAGCT GCACACGTTT
TTGCACAAGG CGCCGGCGAT CGGCCGACCG ACGGCGATCG CATTCGACCT CGATCCGGGG
CCGCCCGCAG ACATCGTGCT CTGCTGCCAG GTCGGATTGT GGGTGAAGGC GGTGTTCGAC
CGGCTGGGTT TGAAAAGTTT CGCGAAGACG TCCGGCTCGA AAGGCCTGCA GATCTACGTG
CCGCTGAACA CGCCGGTGAC CTACGACCGG ACGAAGGCGT TCGCGCACAC GCTCGCGCAG
GCGCTGGAGC GGCAGTTTCC GGACGTGGTC GTGTCGAAGA TGCTAAAGTC ACTGCGCACC
GGCAAGGTGC TCGTGGACTG GAGCCAGAAC GACGATCACA AGACGACGGT GAACGTCTAC
TCGTTGCGCG CGAAGGACCA GCCGACGGTG TCGACGCCCG TCACGTGGGA AGAAGTCGAG
GCGGCGTGGA AAAAGCAGAA GGCGGATCTG CTCGTGTTCG AGTCGGAAGA CGTGGTGAAG
CGAATCGCGA AACACGGCGA TCTGTTCGCG CCGGTGTTGC AGCTGAAACA GAAGCTTCCG
CCGATCGGAG AACTGGCGTG A
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| Protein sequence | MATKTELVVA GTRLMVSNLD KVMYPKTGFT KGNVIDYYVR VADVLLPHLK NRPITLKRYP
DGVAGFFFYE KQCPPHRPKW VKTATVPRGK REGEIHYCVM NDLPALVWAA NLADLELHTF
LHKAPAIGRP TAIAFDLDPG PPADIVLCCQ VGLWVKAVFD RLGLKSFAKT SGSKGLQIYV
PLNTPVTYDR TKAFAHTLAQ ALERQFPDVV VSKMLKSLRT GKVLVDWSQN DDHKTTVNVY
SLRAKDQPTV STPVTWEEVE AAWKKQKADL LVFESEDVVK RIAKHGDLFA PVLQLKQKLP
PIGELA
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