Gene Oter_4290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4290 
Symbol 
ID6208196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5568675 
End bp5569838 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content68% 
IMG OID641693958 
Productintegrase catalytic region 
Protein accessionYP_001821163 
Protein GI182416097 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.530909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTGGA AGATCAAAAC GGCGGAGCAG CAGCGTCAGG CTCTCGCTCG GGAGATGACG 
CGAGGCACGG TGTCGGTGAC CGCGTTGTGC GCGCGGTTTG GCGTGAGCCG CACGACCGCT
TACAAGTGGG CGGCGAGGTA TGTGGCTCAG GGGGTAAACG GGCTGGTTGC GCGACAACCG
GGCCGCCCCA AACAGGTGAG CCAGGCGTTG GCGCGGTGGC ACGCGCGCGT GTTGCTCGCG
CGTCAGGCGC GGCCCAGTTG GGGTGCGCCC AAGTTGCGGT GGTGGCTCGA GCGGACGCAT
CCCGGCGAGC GAGTGCCGTG TAGCCGGACG CTCCACCGGT GGCTGGTAGC CGCCGGTCGC
GTGCACCAGC GACGTCGCAA GCTTAGAGCC GGACCGGGGC GGCCCGCCAC CGTGCTCGCC
GAGCGAGTGA ACGCGGTCTG GACCGCGGAC TTCAAGGGAG ACTTTTACAC CAAAGACGGA
GCGTGGATCT TGGCTTTAAC GGTGCGCGAT CTGTACAGCC GCTTCATGCT TACGGCCCAT
CCCGTGCCCC GGCAGAGCGA GCCGGTGGTC CGCCGCGTGT TCGCGCGGCT GTTCCGCCGC
TTCGGCGTGC CGCAGGCGAT TCGGGTTGAC CGCGGCACGC CGTTTTGCGG CAGCGGGCCG
TATGGCCTGA CCGCGCTGAG CCTATGGTGG CAGCGGCTGG GCATCGAAGT GCAGTTTGTC
AGCCGCAAAC GCCGCCTCGA CAACAACGCT CACGAGCAGA TGCACCGCAT GCTCAAGGCC
GAGGCCGCCA CGCCCGTGTC CCGCTCCTAC GGCGCGCAAG TCCGACGCCT GCAGCGCTGG
TGCGGCCGGT ACAACCACGA CCGTCCGCAT GAGGGTTTGG CCGGACGCAC TCCGGCCAGC
CTCTACCGCC CGAGCACCCG GCTGCTGCCC CGACTCGTGC CGCCACAGTA CCCGCTCGGC
TGCGTCACTC GCCGGGTCAG GCCTCACGGC TACGTGAAGC TGGACGGCAG CCATCGCCAC
ATCGGTCGGG CCTTCGTTGG CCTGACCGTG GCGTTCACCC CTTACCGGCA GCTTTACCGC
GTACACTTCG ATTCCCTCCT GCTGGGCACG ATCGACCCGC GGCTAACCAG ATCCGGCCTC
GTCCCCGTTC GTAGGTTCAG GTGA
 
Protein sequence
MPWKIKTAEQ QRQALAREMT RGTVSVTALC ARFGVSRTTA YKWAARYVAQ GVNGLVARQP 
GRPKQVSQAL ARWHARVLLA RQARPSWGAP KLRWWLERTH PGERVPCSRT LHRWLVAAGR
VHQRRRKLRA GPGRPATVLA ERVNAVWTAD FKGDFYTKDG AWILALTVRD LYSRFMLTAH
PVPRQSEPVV RRVFARLFRR FGVPQAIRVD RGTPFCGSGP YGLTALSLWW QRLGIEVQFV
SRKRRLDNNA HEQMHRMLKA EAATPVSRSY GAQVRRLQRW CGRYNHDRPH EGLAGRTPAS
LYRPSTRLLP RLVPPQYPLG CVTRRVRPHG YVKLDGSHRH IGRAFVGLTV AFTPYRQLYR
VHFDSLLLGT IDPRLTRSGL VPVRRFR