| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4282 |
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| Symbol | |
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| ID | 6208116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5550854 |
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| End bp | 5553001 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641693950 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001821155 |
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| Protein GI | 182416089 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCC GCCCCGGCTC CTCGTCCCCC TCCACCCCCG CCGATCCGTT CGCGCTGCCG
GCCCGTTGGC TGTATCCGCT GCTCTTCCTC GTGGCGCTGG CAGCCTATTG GCCCGCGCTC
GGTGGCGGCG TGTTGTGGGA CGACCTTGGT CACCTCACCC GCCAGGATCT GCGCTCGTTC
GATGGACTCG GCCGCATTTG GTTCGAGATC GGCGCCACCC AGCAATACTA TCCGCTGCTG
CATTCGGCGT TCTGGCTGGA GCATCGGCTG TGGGGCGACG CGACGCTCGG CTATCATCTC
ACGAACGTCT TCCAGCACGC CCTCGTCGCC TGTTTGTTCG CCGCGTTGCT GCGCCGGCTG
GCCGTCCCCG GCGCCGCGCT TGCCGCCCTG CTGTTTGCGC TCCATCCGGT GGGCGTCGAG
TCCGTCGCGT GGATCTCGGA ACAGAAGAAC ACCCTCTCCG CGATCTTCTA TCTCGCCGCC
GCGCTCGCGT ATCTGCAGTG GCACGGGCGT CCCGCCCGTG AATCCATGTT GGGCGTGGCA
CGGGGGCCAG ATCCGGCTCG ATCCCCGACC GAAACGCCCG CGCCACCTCG TTCTGCGCCC
CCGCTTGCGT GGGAGCGCGG CCGTCCCCGG CCGCTCTTCG GGTATTTCTT CGCCACCTTT
CTTTTTCTCT GCGCTTTGCT GACGAAAACC GTCACCGCCA CACTACCGGC GGCGCTGCTG
GTGATCTTCT GGTGGCGCCG CGGCAAGCTC GGCTGGCGGC ACGACGTGGT GCCGCTGCTT
CCGTGGTTCG GCCTGAGCAT TGCCGGCGGC GCGCTCACCG CACACTTCGA ACGCACGCTC
ATCGGCGCGC AGGGCGCCGC GTTCGATCTT GGCTGGATTG AGCGTGGCCT GCTGGCCGGT
CGCGTGGTGT GGTTCTACCT GGGCAAACTT CTCTGGCCAG CTGAGCTGAG TTTCATCTAT
CCGCGCTGGC ACGTCGACGC CACCGCCTGG TGGCAATGGC TCTTCCCGCT CGCCACCCTC
GCGGTATTGG CGGTGCTTTG GCGTATCGCC CACTCCGGCT CCCAACCCTC AACTCTCAAC
TCTCAACTCT CCGCCCCTGC CCTCCGTAGG CTTGGCGAAG GAGGGCGCCG CGCTCCGCTC
GCCGCGGCAC TCCTCTTCGG CGGCACGCTG TTTCCCGTCC TCGGTTTTTT CAACGTCTAC
CCGTTCGTCT TTTCCTACGT CGCCGACCAC TTCCAATATC TCGCCGCGCT CGCCGTCTTC
GCCTTGGTCG CCGCGGCGAT CGCCCACGCT GCGGTGCGCT GGACTCGTCC CGCCGCCCTC
TCCAGCGCGG GCGTGATCCT GCTGGTGCTC GGCGCGCTGA CCTGGTCGCA GGCCGCCATC
TATCGCGACG GGTTCAGGCT CTACCGCGAC ACCCTCGCGA AAAACCCCGA TTGCTGGATG
GCGCACAACA ACCTGGCGAT GTTGCTCACC GAATCCGGCC GGCCCGCGGA AGCGATTCCG
CATCTCGAGC AGGCGCTCCG GATCCGACCC GACTATCCGC AGGCGATGAG CAATCTGGGC
GACGATCTCA TCCGGCTCGG CCGGTCGCGG GAAGCGATTC CGCACCTCGA GCGCGCGCTG
GCGCTTCAGC CGGACTACGT CCAGGCGCAC AACAACCTCG GCACGGCGCT GCTCACGCTC
GATCGGGCGG CCGAGGCGAT CGCGCATTTC GAACGCGCCG TGCAGCTCGA CCCGCGCTAC
ACCATGGCTC ACTACAATCT CGGCCTCGCG CTGGCCCAGA CGGATCGGGT GCGGGAGGCC
ATTCCTCACT TCGAGCGCGT CGTCACCCTG CAGCCCACTC ATGCGCACGC CGAGCTCAGC
CTCGCCTACG CCCTCGCCTC CACTGATCGG TTCAGCGAAT CCATTCGGCA CTTCGAGCGC
GCGCTCGAGC TCGAACCCGA TTCCGTCGAA GCCCATCAGA CCTACGCGCG GATGCTCGCC
CGACACGGAC AGCTCGACCA GGCGCTCCCG CATTTCCGCG CCGTCGTGGA GCTGATGCCA
CAGTCCGGCG CGGCGCATCG CGACTTGGGC TTTGCGCTCC GTCAGCTCGG CCGCAGCGAC
GAAGCCATGC CGCACTTTCT CGAAGCGCAG CGGCTCGGCG AACGATAG
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| Protein sequence | MSSRPGSSSP STPADPFALP ARWLYPLLFL VALAAYWPAL GGGVLWDDLG HLTRQDLRSF
DGLGRIWFEI GATQQYYPLL HSAFWLEHRL WGDATLGYHL TNVFQHALVA CLFAALLRRL
AVPGAALAAL LFALHPVGVE SVAWISEQKN TLSAIFYLAA ALAYLQWHGR PARESMLGVA
RGPDPARSPT ETPAPPRSAP PLAWERGRPR PLFGYFFATF LFLCALLTKT VTATLPAALL
VIFWWRRGKL GWRHDVVPLL PWFGLSIAGG ALTAHFERTL IGAQGAAFDL GWIERGLLAG
RVVWFYLGKL LWPAELSFIY PRWHVDATAW WQWLFPLATL AVLAVLWRIA HSGSQPSTLN
SQLSAPALRR LGEGGRRAPL AAALLFGGTL FPVLGFFNVY PFVFSYVADH FQYLAALAVF
ALVAAAIAHA AVRWTRPAAL SSAGVILLVL GALTWSQAAI YRDGFRLYRD TLAKNPDCWM
AHNNLAMLLT ESGRPAEAIP HLEQALRIRP DYPQAMSNLG DDLIRLGRSR EAIPHLERAL
ALQPDYVQAH NNLGTALLTL DRAAEAIAHF ERAVQLDPRY TMAHYNLGLA LAQTDRVREA
IPHFERVVTL QPTHAHAELS LAYALASTDR FSESIRHFER ALELEPDSVE AHQTYARMLA
RHGQLDQALP HFRAVVELMP QSGAAHRDLG FALRQLGRSD EAMPHFLEAQ RLGER
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