Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4273 |
Symbol | |
ID | 6208242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5532206 |
End bp | 5533921 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641693941 |
Product | pectinesterase |
Protein accession | YP_001821146 |
Protein GI | 182416080 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases [COG4677] Pectin methylesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGTT TCTCCCGCTC TCTCTTCGTT CTCGCCTTGC TCGCTTCCGT TTTCACCGCG GTTGGCTCGG CCAAGCCCGA CGCGATCGTC GCCCCCGACG GCTCCGGCCA GTTCACCTCG CTGCAGGACG CGATCAGCGC GGCGCCGATG CGCACTGACC CGGCCGCACC GGCGTGGGTG ATTCTGGTCA AGCCCGGCAC CTATCGCGAG CGCATCTACG TGCAGCGCGA GCGCGGCAAC ATCCACGTGC TCGGCGAGGA CGCGACGACG ACGATCGTGA GCTACGATCT GCACGCCAAT CTCCCCGGCC CCGACGGCAA GCCGATCGGC ACGTTCCGGA CGCCAACGCT CCAGATCGAC GGCGATGGCA TGATTTGGGA AAACATCACC ATCGCGAACT CCGCCGGGCC GGTCGGTCAG GCGCTCGCGC TCCGCGCGGA CGGCGATCGA CTGGTGTTTC GCCACTGCCG TTTCCTCGGC TGGCAGGACA CGCTCTTGCT CAACCGCGGC CGGCATTATT TCGTCGACTG CACCATCGAA GGCCACGTCG ATTTCATTTT CGGCGCGGCC ACCGCGTTCT TCGATCACTG CGCCATTCGC TGCCTCCGCG ACGGCTATAT CACCGCCGCG TCGACGCCGA AGGGCGCCGC GCACGGCTTT GTCTTTGCGG ACTGCACCAT CACCGGCGCT GAAGGGGTGA AGACCTACCT GGGCCGGCCG TGGCGTGATT TTGCCCAAAC CGTTTTTCTC CGGACCGAGA TGTCGGCCGC GGTCCGCCCG GAGGGCTGGC ACAACTGGAA CAAGCCCCAC GCGGAACAAA CCACATTCTA TGCCGAGTTC GGCAGCACCG GTCCGGGCGC AAATCCGTCG GCTCGCGTGG CCTGGGCGCA CACACTCACC GCCGAGGATG CGGCTGATCT GACGCCGGCG CACGTGCTCG GTGGCGCCGA TGGCTGGGAT CCGGTTGCCG GAGCGGAACG CGCGAGCGTT TCACGCGAAA GTCCTACGAC GTCTGCTACG ACGACGGATG CTGCCCCTCC GCCGCGTCGG CCCGGGATCA CGCGCATCGT TCTTGTCGGC GATTCCACGG TGACGGATCG CTCCGGCTGG GGCCGCGGGT TCAAGCAGTT GCTCGGGCCC GGCGCCGAAT GCATCAACAC CGCGCTCGGC GGCCGCAGCT CGAAAAGTTT CCGCGGCGAA GGCCATTGGG AACCCGCGCT CGCGCTGCGC GGCGACTACT ACCTCATTCA ATTCGGTCAC AACGACCAGC CGGGCAAGGG CCCGAAGCGC GAGACCGATC CGGATACGAC GTTCGCGCAG AACCTCGCCC GCTATGTTGA CGAAGTTCGC GCGATTGGCG CCGAGCCGGT GCTGTTGACT TCGCTCACGC GTCGCAACTT CGATCCGGCG AATCCGGGTC GCATCCTCTC GACGCTCACG CCCTACGCCA ACGCCGCGAA ACGAGTCGCC CGCGAGAAGG CCGTGCCGTT GATCGACCTG CACGCGCGCA GCATCGCGTT GTGCGAAGCC TGGGGACCGG AACGAACCGC CGCGCTGAAT CCCCGCAAAC CCAACAGCCA GGATCCCGAC ACCACTCATT TGGACGCGAA TGGCAGCACA ATCTTCGCGC AGCTCGTGGT CGATGACCTG CGGCAAGCCG TGCCGGCGCT CGCCTTCATT CTCCAAACCG CGCCGCAGCC CGGAAATCGG CCTTGA
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Protein sequence | MNRFSRSLFV LALLASVFTA VGSAKPDAIV APDGSGQFTS LQDAISAAPM RTDPAAPAWV ILVKPGTYRE RIYVQRERGN IHVLGEDATT TIVSYDLHAN LPGPDGKPIG TFRTPTLQID GDGMIWENIT IANSAGPVGQ ALALRADGDR LVFRHCRFLG WQDTLLLNRG RHYFVDCTIE GHVDFIFGAA TAFFDHCAIR CLRDGYITAA STPKGAAHGF VFADCTITGA EGVKTYLGRP WRDFAQTVFL RTEMSAAVRP EGWHNWNKPH AEQTTFYAEF GSTGPGANPS ARVAWAHTLT AEDAADLTPA HVLGGADGWD PVAGAERASV SRESPTTSAT TTDAAPPPRR PGITRIVLVG DSTVTDRSGW GRGFKQLLGP GAECINTALG GRSSKSFRGE GHWEPALALR GDYYLIQFGH NDQPGKGPKR ETDPDTTFAQ NLARYVDEVR AIGAEPVLLT SLTRRNFDPA NPGRILSTLT PYANAAKRVA REKAVPLIDL HARSIALCEA WGPERTAALN PRKPNSQDPD TTHLDANGST IFAQLVVDDL RQAVPALAFI LQTAPQPGNR P
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