Gene Oter_4273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4273 
Symbol 
ID6208242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5532206 
End bp5533921 
Gene Length1716 bp 
Protein Length571 aa 
Translation table11 
GC content66% 
IMG OID641693941 
Productpectinesterase 
Protein accessionYP_001821146 
Protein GI182416080 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases
[COG4677] Pectin methylesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTT TCTCCCGCTC TCTCTTCGTT CTCGCCTTGC TCGCTTCCGT TTTCACCGCG 
GTTGGCTCGG CCAAGCCCGA CGCGATCGTC GCCCCCGACG GCTCCGGCCA GTTCACCTCG
CTGCAGGACG CGATCAGCGC GGCGCCGATG CGCACTGACC CGGCCGCACC GGCGTGGGTG
ATTCTGGTCA AGCCCGGCAC CTATCGCGAG CGCATCTACG TGCAGCGCGA GCGCGGCAAC
ATCCACGTGC TCGGCGAGGA CGCGACGACG ACGATCGTGA GCTACGATCT GCACGCCAAT
CTCCCCGGCC CCGACGGCAA GCCGATCGGC ACGTTCCGGA CGCCAACGCT CCAGATCGAC
GGCGATGGCA TGATTTGGGA AAACATCACC ATCGCGAACT CCGCCGGGCC GGTCGGTCAG
GCGCTCGCGC TCCGCGCGGA CGGCGATCGA CTGGTGTTTC GCCACTGCCG TTTCCTCGGC
TGGCAGGACA CGCTCTTGCT CAACCGCGGC CGGCATTATT TCGTCGACTG CACCATCGAA
GGCCACGTCG ATTTCATTTT CGGCGCGGCC ACCGCGTTCT TCGATCACTG CGCCATTCGC
TGCCTCCGCG ACGGCTATAT CACCGCCGCG TCGACGCCGA AGGGCGCCGC GCACGGCTTT
GTCTTTGCGG ACTGCACCAT CACCGGCGCT GAAGGGGTGA AGACCTACCT GGGCCGGCCG
TGGCGTGATT TTGCCCAAAC CGTTTTTCTC CGGACCGAGA TGTCGGCCGC GGTCCGCCCG
GAGGGCTGGC ACAACTGGAA CAAGCCCCAC GCGGAACAAA CCACATTCTA TGCCGAGTTC
GGCAGCACCG GTCCGGGCGC AAATCCGTCG GCTCGCGTGG CCTGGGCGCA CACACTCACC
GCCGAGGATG CGGCTGATCT GACGCCGGCG CACGTGCTCG GTGGCGCCGA TGGCTGGGAT
CCGGTTGCCG GAGCGGAACG CGCGAGCGTT TCACGCGAAA GTCCTACGAC GTCTGCTACG
ACGACGGATG CTGCCCCTCC GCCGCGTCGG CCCGGGATCA CGCGCATCGT TCTTGTCGGC
GATTCCACGG TGACGGATCG CTCCGGCTGG GGCCGCGGGT TCAAGCAGTT GCTCGGGCCC
GGCGCCGAAT GCATCAACAC CGCGCTCGGC GGCCGCAGCT CGAAAAGTTT CCGCGGCGAA
GGCCATTGGG AACCCGCGCT CGCGCTGCGC GGCGACTACT ACCTCATTCA ATTCGGTCAC
AACGACCAGC CGGGCAAGGG CCCGAAGCGC GAGACCGATC CGGATACGAC GTTCGCGCAG
AACCTCGCCC GCTATGTTGA CGAAGTTCGC GCGATTGGCG CCGAGCCGGT GCTGTTGACT
TCGCTCACGC GTCGCAACTT CGATCCGGCG AATCCGGGTC GCATCCTCTC GACGCTCACG
CCCTACGCCA ACGCCGCGAA ACGAGTCGCC CGCGAGAAGG CCGTGCCGTT GATCGACCTG
CACGCGCGCA GCATCGCGTT GTGCGAAGCC TGGGGACCGG AACGAACCGC CGCGCTGAAT
CCCCGCAAAC CCAACAGCCA GGATCCCGAC ACCACTCATT TGGACGCGAA TGGCAGCACA
ATCTTCGCGC AGCTCGTGGT CGATGACCTG CGGCAAGCCG TGCCGGCGCT CGCCTTCATT
CTCCAAACCG CGCCGCAGCC CGGAAATCGG CCTTGA
 
Protein sequence
MNRFSRSLFV LALLASVFTA VGSAKPDAIV APDGSGQFTS LQDAISAAPM RTDPAAPAWV 
ILVKPGTYRE RIYVQRERGN IHVLGEDATT TIVSYDLHAN LPGPDGKPIG TFRTPTLQID
GDGMIWENIT IANSAGPVGQ ALALRADGDR LVFRHCRFLG WQDTLLLNRG RHYFVDCTIE
GHVDFIFGAA TAFFDHCAIR CLRDGYITAA STPKGAAHGF VFADCTITGA EGVKTYLGRP
WRDFAQTVFL RTEMSAAVRP EGWHNWNKPH AEQTTFYAEF GSTGPGANPS ARVAWAHTLT
AEDAADLTPA HVLGGADGWD PVAGAERASV SRESPTTSAT TTDAAPPPRR PGITRIVLVG
DSTVTDRSGW GRGFKQLLGP GAECINTALG GRSSKSFRGE GHWEPALALR GDYYLIQFGH
NDQPGKGPKR ETDPDTTFAQ NLARYVDEVR AIGAEPVLLT SLTRRNFDPA NPGRILSTLT
PYANAAKRVA REKAVPLIDL HARSIALCEA WGPERTAALN PRKPNSQDPD TTHLDANGST
IFAQLVVDDL RQAVPALAFI LQTAPQPGNR P