| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4269 |
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| Symbol | |
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| ID | 6206458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5522600 |
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| End bp | 5526202 |
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| Gene Length | 3603 bp |
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| Protein Length | 1200 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641693937 |
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| Product | hypothetical protein |
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| Protein accession | YP_001821142 |
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| Protein GI | 182416076 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0489651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCGCC TCACCGCCGC CTTTCTTGCT TTGGTGGCGC TCGCGTCCGA GCTCGGCGCG
GCGGAATCGC TCCGCGCGTC GCGCTTCACG CCGAACCTCG TCGACAACCT CGATCGCCCG
CTGCGCTATC AGCCCGACGG CGCGGACTTC CTCATCGAGA ACGGCACCGA GTTTTTCAAT
CGCGCGCTCT ACGGCGGCAA CACGGCGTTC CGCGTCGACG GCGGCGACAA ACCCGAGTTC
GTCCTCTACC TGCCCGGTCG CGGCGGCAAT CTGCGCTTCG CACTCCACAC GTCCGCCGGC
GCGAAGTGGC TGCACGACGC CACGCACATC GCGACGCGCT ACCGGCCGGG CCAGTTGATT
TACGAGATTC GTGATCCGCT ACTCGGCGAG GATCGCGTGC TCACGCTGTC AGTTCTCGCC
TACGCCGACG CCGAAGGATG CATTGTCCGC GCCGAGCTCG CCGGGTCCGA TCGCGATGCG
CCGAGTGCGC CGCTGGAACT CCTCTGGGCC TACGGCGGGG TGAACGGCCA GCGCGGCAAG
CGCGACGGCG ACATCGGCAC CGAAGCCGTG CCGATCAGCG AGTGGTTCCA GCTGCGGCCG
GAGTTTTGTC GCGGTAACGT AATCACGCTC GCCGCCACCG GCTTCACGCT GCGCGCGAAG
CCCGCGACGA TTGTCGGCGA CGCACCGGCC GGCTCGCATC TCGCCCTCGG CGACGCCGCG
AATTGGAATG ATCTGCCCGC GCTCATCACC GCCGGTTGGG GACGCGACGC CCTCGTCGCG
TCGTTCGATC AGAACGCGAC GAGGACGTCG CGTCCCCATA AAGGCACCGA AGGCGGACCC
ACCTTCTCAC TCGTCATCGG CCGCTGCGCG CTCGAGACCG GACGGCCGCT GTTTCTCTCG
CTCGAATGCA ACGTCGCCGG CGCCCGCGCC GACGACGATC TCGATACCTA TCGCGCGGTC
ACGGCCCTGC GGGGTGATTC TCGCCCGCCG ACAGAAGACA TGGGCGGGAC GCCCATGCCA
CGTGGCACGG GCGTCCCGCC CGTGGGTTTG GCCGCGGGTT CGGCGGTAGG GCGGGGTCAG
CAGGTTCCGC CCCGCGACGA TGCAGCCGAC GAGGACGCTT CTGTGAGCAT TTGTAGCACC
GACCTCGCGC GCCGCTGGCG CGAAACCGAG CGCCATTTCC GCGAACTGCG CCAGCGCGTG
CGGATCGACA CGCCCGATCC GTTTCTCAAT GCCGCAGTCG GCGCGCTGAA CGTCGCCGCC
GATGCGGCGT GGGACGCACC GCAGCAGGCG ATCATGCACG GCGCGATCGC GTGGCGCACC
AAGCTGCTCG GCTGGCGCGG GCCCTACGCG CTCGACGCGC TCGGCTGGCA TGAACGGTTT
CAACGCAACT TCACCTATTG GGCCGGCCGG CAGAACGTGG ATCCGATTCC AGCATCGCTT
CCGCCCGCGG ACGAGAACGC GAACCTCGCC CGCAATGAGG CGGGGCTGCA CAGCAACGGC
GATCTGTCGA ACTCGCACTA CGACATGAAC CTCGTCGCGA TCGACGCGCT GTTCCGGCAT
CTGCACTGGA CCGGCGACCT CGCTTTCGCC GAGAAAATGT GGCCCGTGAT CGAGCGGCAC
CTGGCCTGGG AACGCCGGTT GTTCCGCCGC GAGTTCGGCC CCGACCGGCT ACCGCTCTAC
GAAGCCTACG CCGCGATCTG GGCCAGCGAC GATCTGCAGT ATCACGGCGG CGGCGTGACG
CACGCTTCCG CCTACAATTA CTACCACAAC ACCCAGGCCG CCCGGCTGGC GCGGCTGCTC
GGCCGCGATC CGCAGCCCTA CGAGCGCGAA GCGGACTTGA TCGCGCGCGC GATGCGCACG
CACCTCTGGC TGCCAGAAGA AGGGGCCTTC GCCGAGTTCA AGGATCTGCT CGGTCTGCAG
CGCGTGCATC CGAGCGCCGC CGTGTGGACG TTCTATCACA CGATGGACGC CGGGCTGCCC
ACACCGCAGG AGGCGTGGCA GATGACGCGG CGGATCGACG CGCAGATTCC TCATCTGCCC
GTTCGCGGCC CGGGCGTTCC GTCCGGTCTG CACGTCGTGT CGACCACCAA CTGGATGCCT
TACACGTGGT CGATCAACAA CGTCGTCCTG CCCGAGGTGG TTCACACTGC GCTCGGATTC
TGGCAGGCCG GCCGTCGCGA GGAGGCGTGG ACGCTGACCA AAGGCGCCCT CCTCGCTTCG
ATGTTCATGG GCATCGCGCC AGGCAACGTT GGCTCGATGT CGTATCTCGA TGTCTACCGA
CGCGAGTCGC AGCGCGATTT CGTCGACAGC TCGGGCGTCC TCTCGCGCGC GCTCGTCGAA
GGACTCTTCG GCCTGAAGCC GGACCTACTC GCGGGCGAGC TGCGCGTCGA ACCGGGTTTC
CCGGCGGACT GGAATCACGC CGCGATCAAC CATCCGGACG TGGCGCTACG GTTCGAGCGC
AGCGGCGACA CGGATCATTA CGTGATCACG CAGCATTTCG CGAAACCGCA ATCGCTCCGG
CTCGTGCTCG CCGCGCCGCG CGATCGCGTC GGCTCGTTCG CCGTCAACGG CGACTCCGCT
TCGTGGCAGG TCATCGAAGA CGCCGTCGGC GCGCCGCGCA TCGTGATCAC GAGCCCGGCC
GGATTCCGGC ACGAGGTTCT GATCCAGTGG GCCGGCCAGC CGATCGCGCA GACGGGCGAC
GCTGTAGCCC GGGTCGGCGA CCTCGGCCTG CCGGGCTCAC CGAGCCCGGC TACATCGATC
CACTTCACGC ACGTGACCCG CGGTCAGATG CGCTGGTGGC AGCCGGTCGA CAATCCCGCT
CGACCCGTAG CAGAAGCGGG GCACCCGGAC GGCTGCAAGC TGTCCGACAT CCCTGCCGGC
GCTCGCTTCG ACTGCGTCGA TCTCACTCCG CACTTCAACG ACCGCGTCAC GCAGATTTTC
CGCAACGTCT ATCGCTCGCC GCGCTCGCCG GCCGTGTCGC TCGCGATTCC GAAGCAGGGG
CTCGGCGGTT GGGCCGGCGG CGTGAACGCC ACCGCCGAGA TCGACGACTC CGGCCTGCGC
CAGGTCGCCG GACAAAACGG CAGTCGCTTG CTCCTGCCGA ACGGCGTGCC GCTCGCGACG
CCGTTCGCTG CCGCGGCGAA CAACATCGTG TTTACCTCGC AATGGGACAA CTATCCGCAC
GAGGCCACGA TTCCGCTCTC CGGCCGCGCG CAGAGCGTGA CGTTGCTGCT CGCCGGCTCG
ACGAATCACA TGCAAAGCCG GATCGACAAC GGCGAGATCG TCGTTGGCTA CTCCGATGGC
ACCACGACAC GACTCGCGCT CGAAAACCCA ACCAACTGGT GGCCGATCGA ACAGGATTAC
TTCCTCGATG ATTTTCAGTT CCAGCGTCCC GGACCGCTGC CGGTGCGCGT CGACCTGAAG
ACCGGCGCCG TCCGGTTGCT CGAGTTGCCC GCGTTCAAGG GCCGCGGCGG CCGTTTCCCC
GGCGGCGCGG CGACCGTGCT CGAACTCCCG CTCGATCCAA CGCGGGAGCT GCGCTCACTC
ACGGTGCGCG CGCTCGCGAA CGAGGTGGTG GTCGGCCTGA TGGCCGCGAC GCTCGTACGG
TGA
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| Protein sequence | MLRLTAAFLA LVALASELGA AESLRASRFT PNLVDNLDRP LRYQPDGADF LIENGTEFFN
RALYGGNTAF RVDGGDKPEF VLYLPGRGGN LRFALHTSAG AKWLHDATHI ATRYRPGQLI
YEIRDPLLGE DRVLTLSVLA YADAEGCIVR AELAGSDRDA PSAPLELLWA YGGVNGQRGK
RDGDIGTEAV PISEWFQLRP EFCRGNVITL AATGFTLRAK PATIVGDAPA GSHLALGDAA
NWNDLPALIT AGWGRDALVA SFDQNATRTS RPHKGTEGGP TFSLVIGRCA LETGRPLFLS
LECNVAGARA DDDLDTYRAV TALRGDSRPP TEDMGGTPMP RGTGVPPVGL AAGSAVGRGQ
QVPPRDDAAD EDASVSICST DLARRWRETE RHFRELRQRV RIDTPDPFLN AAVGALNVAA
DAAWDAPQQA IMHGAIAWRT KLLGWRGPYA LDALGWHERF QRNFTYWAGR QNVDPIPASL
PPADENANLA RNEAGLHSNG DLSNSHYDMN LVAIDALFRH LHWTGDLAFA EKMWPVIERH
LAWERRLFRR EFGPDRLPLY EAYAAIWASD DLQYHGGGVT HASAYNYYHN TQAARLARLL
GRDPQPYERE ADLIARAMRT HLWLPEEGAF AEFKDLLGLQ RVHPSAAVWT FYHTMDAGLP
TPQEAWQMTR RIDAQIPHLP VRGPGVPSGL HVVSTTNWMP YTWSINNVVL PEVVHTALGF
WQAGRREEAW TLTKGALLAS MFMGIAPGNV GSMSYLDVYR RESQRDFVDS SGVLSRALVE
GLFGLKPDLL AGELRVEPGF PADWNHAAIN HPDVALRFER SGDTDHYVIT QHFAKPQSLR
LVLAAPRDRV GSFAVNGDSA SWQVIEDAVG APRIVITSPA GFRHEVLIQW AGQPIAQTGD
AVARVGDLGL PGSPSPATSI HFTHVTRGQM RWWQPVDNPA RPVAEAGHPD GCKLSDIPAG
ARFDCVDLTP HFNDRVTQIF RNVYRSPRSP AVSLAIPKQG LGGWAGGVNA TAEIDDSGLR
QVAGQNGSRL LLPNGVPLAT PFAAAANNIV FTSQWDNYPH EATIPLSGRA QSVTLLLAGS
TNHMQSRIDN GEIVVGYSDG TTTRLALENP TNWWPIEQDY FLDDFQFQRP GPLPVRVDLK
TGAVRLLELP AFKGRGGRFP GGAATVLELP LDPTRELRSL TVRALANEVV VGLMAATLVR
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