Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4264 |
Symbol | |
ID | 6204256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5512957 |
End bp | 5513724 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641693932 |
Product | 2-deoxy-D-gluconate 3-dehydrogenase |
Protein accession | YP_001821137 |
Protein GI | 182416071 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCCA TCCTCGAAAA ATTCAGTCTC AACGGAAAAG TCGCCGTCGT CACCGGCGCC GCGCGCGGCC TCGGTCAGGG CATGGCCCTC GCGCTCGCCG AAGCCGGCGC GGACATCGTC GCGGTCGACA TCCTCCCCGC CGATGACACC AAGAAGCAGG TCGAGGCGCT TGGTCGCAAA GCGATCACGC TCGCCGCCAA TCTCGGCGAC CGCGCCGCGA TCCCACAGGT GATCGCCAAC GCCCGCAAGC AGTTCGCCCA CCTCGACGTG CTCGTGAACT GCGCCGGCAT CATCCGCCGC GAGGACTTCA CCAAGTTCTC CGAGAAAGAC TGGGACGACG TCATGGGCAT CAACATCGAC GCCGTGTTTT TCCTCTCGCA GGCGTTCGTG CGCGACGCGA TCGAGCGCAA CGCGCCGGCG AAGATCATCA ACATCGCCTC GATGCTGTCG TTCCAAGGCG GTATCCGCGT CCCCTCCTAC ACGGCGTCGA AGAGCGCGGT GCAGGGACTC ACGCGGCTGA TGGCGAATGA ACTCGCCGCG AAGGGCATCA ACGTGAACGC GATCGCGCCC GGCTACATGG CCACCGACAA CACCGCGCCG CTGCGCGCCG ACGAGAAACG CAGCGCGGCG ATTCTCGAGC GCATTCCGGC CGCCCGCTGG GGCACGCCCG ACGACCTCAA GGGCACGGCG GTCTTCCTCG CCTCCTCCGC CTCGGACTAC GTCAACGGCT ACACGATCGC CGTCGACGGT GGCTGGCTGG CCCGGTAA
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Protein sequence | MSSILEKFSL NGKVAVVTGA ARGLGQGMAL ALAEAGADIV AVDILPADDT KKQVEALGRK AITLAANLGD RAAIPQVIAN ARKQFAHLDV LVNCAGIIRR EDFTKFSEKD WDDVMGINID AVFFLSQAFV RDAIERNAPA KIINIASMLS FQGGIRVPSY TASKSAVQGL TRLMANELAA KGINVNAIAP GYMATDNTAP LRADEKRSAA ILERIPAARW GTPDDLKGTA VFLASSASDY VNGYTIAVDG GWLAR
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