| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4256 |
|---|
| Symbol | |
|---|
| ID | 6206063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 5504965 |
|---|
| End bp | 5505993 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641693924 |
|---|
| Product | aspartyl/asparaginyl beta-hydroxylase |
|---|
| Protein accession | YP_001821129 |
|---|
| Protein GI | 182416063 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.168829 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCTCG CGCACCTGCT GGGCTGGACG CCGACGCGGT TCTTCTGGCG CGAAGGCGAG
CCGCACGTGG AGTGGGGGCG GCTGCCGGCC GCGCCGTTCT CCGATTCGTT CTTCGAACAA
ACGCTGACGC GGGCCATGCG CAATCCGGCC CGACTGCTGT TCCGGCAGAC GACGCCGGCC
GACGTGCTCG ACGAATTCGA CCGGGAGCAG CCCGGACTGC CGCCGACCGG TTTCATCTTT
CACATGTCGC GGTGCGGCTC GACGCTGATC GCGCAGATGC TGGCGGCGCT GCCGCAGAAC
GTGGTGGTGT CCGAGGCGCC GCCGATCGAT CAGGTGTTGC AGTCGCCGCT GCGCGACCCG
CGGATCACGC CCGGGCAGCG CCGCACGTGG CTGCGCGGCA TGGTCACCGC GCTTGGGCAG
CGACGGCAGG GCGGGGAGTC GCGCTACTTC ATCAAATTCG ACAGCTGGCA CACGCTGGAA
CTGCCGGTGA TCCTCGAGGC GTTTCCGGAC GTCCCGTGGC TGTTCGTCTA CCGCGATCCG
GTCGAGGTGC TGGTTTCACA CCGCCGCCGC CGCGGCTCGC AGATGGTCCC GGGCCTGCTC
GACCCGCGGC TGTTCGCGAT CGACGGGGCC GCACTGCCGG CGCTGTTGCC CGACGAGTAC
GGCGCGCGCG TGCTGGCGCG GATCTGCGGC GCGGCGGCGG CGCACGCATC GCTCGGCCGC
AGCCGGCTGG TGAACTTCAA CCAGCTGCCG GCCGCGGTGG GGGAAAGCCT GGGGCGGTTT
TTCGGAATCG AATGGACCGC CGACGAACGC GCGCGCCTGG CGCGCGCCTC GCGGATGGAC
GCCAAATCGC CCAACGAAAC GTACCGCGAC GATCGCGCCG AAAAGCAGCG CGAAGCGACC
GGGGAGATCC GCCGGCTCGC CCGGGAGTGG GTGGCAGGGA TCTATGCCGA ACTCGAGGCC
GCGCGCGCGG CGTCGGCGAG CAGCCGTTCG CGCAGCCAGT CGTTCACCCC GCAATCGATC
ACGCGATGA
|
|---|
| Protein sequence | MSLAHLLGWT PTRFFWREGE PHVEWGRLPA APFSDSFFEQ TLTRAMRNPA RLLFRQTTPA
DVLDEFDREQ PGLPPTGFIF HMSRCGSTLI AQMLAALPQN VVVSEAPPID QVLQSPLRDP
RITPGQRRTW LRGMVTALGQ RRQGGESRYF IKFDSWHTLE LPVILEAFPD VPWLFVYRDP
VEVLVSHRRR RGSQMVPGLL DPRLFAIDGA ALPALLPDEY GARVLARICG AAAAHASLGR
SRLVNFNQLP AAVGESLGRF FGIEWTADER ARLARASRMD AKSPNETYRD DRAEKQREAT
GEIRRLAREW VAGIYAELEA ARAASASSRS RSQSFTPQSI TR
|
|---|
| |