Gene Oter_4249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4249 
Symbol 
ID6207416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5491013 
End bp5492752 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content67% 
IMG OID641693917 
Productputative PAS/PAC sensor protein 
Protein accessionYP_001821122 
Protein GI182416056 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.279897 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCT GGCCTGTCAT CTCGGTCGTA CTTCTTGGCA TCGCGTGCGT GTACGTCGTC 
GTCGCGTGCT ACACGTGGCG TCGTCGCTCG GTGCCGGGGC TCGCGGCCTA CACCGGCATC
ATCGCCGCCG GCAGTCTGTA CCTCGGCGGA TACGCCTGCG AACTCGCGCC CGCATGCGCC
GCGTACGTCG CTTGGTGCGA GAACGTGACG TTCCTCGGCG CGCTCCTGTT TCCGCCGCTG
ATCATGTGCG TGTTTGCCGA CTTCACCGGA CACGAGCGCT GGCTGCCCCG TTGGCTGCGC
TTCGCGCTGT TCGGTTTCGC TGCGCTCGAC ATCATGAGCA AGCTGACGGA CCACTGGCAC
GGGCTGACGC ATCGCACCAT CACGCTCGAG CCGCGCGGCA GCTGGAACAG CTTCTCCATC
ACCCCGGGTC CCTTGTACTG GGTGACCAAC GGCTATGTGC TCACGGCGAT GGTGTTCGCG
CTGTTCGCGG TCGCGCACAC CTGGCCGCAC GCGAACCGTA TTTTCCGACG GCAGCTCGCC
GCGGTCACGG TTTCCATCAT GATACCGGCG TCCGCCCACC TCTGGCGGCT GTCGGGCTAC
AGCCCGTGGG GATCGCTGGA TCTCGTGCCG TTCGCGATTC CACCCGGCAT GCTGATCCTC
GCCTGGACCG TCTGGCACGA TCGCTTCGCC GGCCACACCC CCATCGCGCG CAACCGCGTG
CTCGCGATGA TGCGCGACGC CATCGTGGTC GCGGACCCCG CGCATCGCGT CGCCGATCTC
AATCCGGCGG CGGCGCAATT GCTGCGCGTG TACGAGCTCG ATGCGGTCGG GCAACCGCTG
GCGCAGGTGC TCGCCCGCTG GCCGGACCTC CTCGAACTCA CCCGCCTCGA CGAGAACCGG
CGACTTGAGA TCGCGGCACC TCCGCCCGCC GAGACGGTTT GGGATGCCGA CTGGCGCCGG
TTGACGGAAG ACGGGCGGCA TCGCGGCTTT CTGCTCAATT TGCGCGACGT CACCGAACGC
AGGCGCGCCG AACAGCAACT CCATCAGCTG CTGACGAGTC GCACGCGCGA GTTGCGCGAA
GCGACCGCGC GGGCGCTGAG CGCGGGCGCC GAGGAACAGG ATCGCATCGG CCAGGAATTG
CACGACACCG TCTGCCCGGA ACTGATCGGA ATCGTGCGGC AGGCGGAACT GCTCGCGCTC
CAGGGTACGA CCGACGAGGC GGTGAACCAG CGGTTGCGCG ATCTGGCCGC ACTCGCGGGC
AACGCATCGC GTCGGGTCCG CGATCTCTCC CACCTGCTGG CGCGACCCGA CGTCGCCCAC
ACACAGTTCG AAGACCTGCT TTACGCCCAG CTGCACCAAC TCGAACAGAC GCTCGGGCTC
ACCTGCGAGT TGGCGATCGA TCACGAGTTC CCGGCGCCAA CTCCGGAGGC GAGCGGTCAT
CTTCTGCGGA TCATACGTGA AGCCGTGGTC AATGCCGCCC GGCACGCCGG CGCCCGACGC
GTCTGGGTCG ATTGTGTGCA GCAGGGTGGC TGCGTCACGA TCAGCGTTTC CAACGATGGC
CGACCGCTGT CCGACGGTGT CGTCTCCTCG GACGGCCTGG GATTCCGCCA GATGCGGATG
CGAGCCGAGC TCCTCGACGC GACGCTCGTG CTGCGAGCGA CCGCAACCGG CGCCGTGATG
GAATTGAGTT TTGCCGCAGT GCCGGCGGCA TCGTCCACCG CCACTCCCGT TGCCACGTGA
 
Protein sequence
MSGWPVISVV LLGIACVYVV VACYTWRRRS VPGLAAYTGI IAAGSLYLGG YACELAPACA 
AYVAWCENVT FLGALLFPPL IMCVFADFTG HERWLPRWLR FALFGFAALD IMSKLTDHWH
GLTHRTITLE PRGSWNSFSI TPGPLYWVTN GYVLTAMVFA LFAVAHTWPH ANRIFRRQLA
AVTVSIMIPA SAHLWRLSGY SPWGSLDLVP FAIPPGMLIL AWTVWHDRFA GHTPIARNRV
LAMMRDAIVV ADPAHRVADL NPAAAQLLRV YELDAVGQPL AQVLARWPDL LELTRLDENR
RLEIAAPPPA ETVWDADWRR LTEDGRHRGF LLNLRDVTER RRAEQQLHQL LTSRTRELRE
ATARALSAGA EEQDRIGQEL HDTVCPELIG IVRQAELLAL QGTTDEAVNQ RLRDLAALAG
NASRRVRDLS HLLARPDVAH TQFEDLLYAQ LHQLEQTLGL TCELAIDHEF PAPTPEASGH
LLRIIREAVV NAARHAGARR VWVDCVQQGG CVTISVSNDG RPLSDGVVSS DGLGFRQMRM
RAELLDATLV LRATATGAVM ELSFAAVPAA SSTATPVAT