Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4249 |
Symbol | |
ID | 6207416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5491013 |
End bp | 5492752 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641693917 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_001821122 |
Protein GI | 182416056 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.279897 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGGCT GGCCTGTCAT CTCGGTCGTA CTTCTTGGCA TCGCGTGCGT GTACGTCGTC GTCGCGTGCT ACACGTGGCG TCGTCGCTCG GTGCCGGGGC TCGCGGCCTA CACCGGCATC ATCGCCGCCG GCAGTCTGTA CCTCGGCGGA TACGCCTGCG AACTCGCGCC CGCATGCGCC GCGTACGTCG CTTGGTGCGA GAACGTGACG TTCCTCGGCG CGCTCCTGTT TCCGCCGCTG ATCATGTGCG TGTTTGCCGA CTTCACCGGA CACGAGCGCT GGCTGCCCCG TTGGCTGCGC TTCGCGCTGT TCGGTTTCGC TGCGCTCGAC ATCATGAGCA AGCTGACGGA CCACTGGCAC GGGCTGACGC ATCGCACCAT CACGCTCGAG CCGCGCGGCA GCTGGAACAG CTTCTCCATC ACCCCGGGTC CCTTGTACTG GGTGACCAAC GGCTATGTGC TCACGGCGAT GGTGTTCGCG CTGTTCGCGG TCGCGCACAC CTGGCCGCAC GCGAACCGTA TTTTCCGACG GCAGCTCGCC GCGGTCACGG TTTCCATCAT GATACCGGCG TCCGCCCACC TCTGGCGGCT GTCGGGCTAC AGCCCGTGGG GATCGCTGGA TCTCGTGCCG TTCGCGATTC CACCCGGCAT GCTGATCCTC GCCTGGACCG TCTGGCACGA TCGCTTCGCC GGCCACACCC CCATCGCGCG CAACCGCGTG CTCGCGATGA TGCGCGACGC CATCGTGGTC GCGGACCCCG CGCATCGCGT CGCCGATCTC AATCCGGCGG CGGCGCAATT GCTGCGCGTG TACGAGCTCG ATGCGGTCGG GCAACCGCTG GCGCAGGTGC TCGCCCGCTG GCCGGACCTC CTCGAACTCA CCCGCCTCGA CGAGAACCGG CGACTTGAGA TCGCGGCACC TCCGCCCGCC GAGACGGTTT GGGATGCCGA CTGGCGCCGG TTGACGGAAG ACGGGCGGCA TCGCGGCTTT CTGCTCAATT TGCGCGACGT CACCGAACGC AGGCGCGCCG AACAGCAACT CCATCAGCTG CTGACGAGTC GCACGCGCGA GTTGCGCGAA GCGACCGCGC GGGCGCTGAG CGCGGGCGCC GAGGAACAGG ATCGCATCGG CCAGGAATTG CACGACACCG TCTGCCCGGA ACTGATCGGA ATCGTGCGGC AGGCGGAACT GCTCGCGCTC CAGGGTACGA CCGACGAGGC GGTGAACCAG CGGTTGCGCG ATCTGGCCGC ACTCGCGGGC AACGCATCGC GTCGGGTCCG CGATCTCTCC CACCTGCTGG CGCGACCCGA CGTCGCCCAC ACACAGTTCG AAGACCTGCT TTACGCCCAG CTGCACCAAC TCGAACAGAC GCTCGGGCTC ACCTGCGAGT TGGCGATCGA TCACGAGTTC CCGGCGCCAA CTCCGGAGGC GAGCGGTCAT CTTCTGCGGA TCATACGTGA AGCCGTGGTC AATGCCGCCC GGCACGCCGG CGCCCGACGC GTCTGGGTCG ATTGTGTGCA GCAGGGTGGC TGCGTCACGA TCAGCGTTTC CAACGATGGC CGACCGCTGT CCGACGGTGT CGTCTCCTCG GACGGCCTGG GATTCCGCCA GATGCGGATG CGAGCCGAGC TCCTCGACGC GACGCTCGTG CTGCGAGCGA CCGCAACCGG CGCCGTGATG GAATTGAGTT TTGCCGCAGT GCCGGCGGCA TCGTCCACCG CCACTCCCGT TGCCACGTGA
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Protein sequence | MSGWPVISVV LLGIACVYVV VACYTWRRRS VPGLAAYTGI IAAGSLYLGG YACELAPACA AYVAWCENVT FLGALLFPPL IMCVFADFTG HERWLPRWLR FALFGFAALD IMSKLTDHWH GLTHRTITLE PRGSWNSFSI TPGPLYWVTN GYVLTAMVFA LFAVAHTWPH ANRIFRRQLA AVTVSIMIPA SAHLWRLSGY SPWGSLDLVP FAIPPGMLIL AWTVWHDRFA GHTPIARNRV LAMMRDAIVV ADPAHRVADL NPAAAQLLRV YELDAVGQPL AQVLARWPDL LELTRLDENR RLEIAAPPPA ETVWDADWRR LTEDGRHRGF LLNLRDVTER RRAEQQLHQL LTSRTRELRE ATARALSAGA EEQDRIGQEL HDTVCPELIG IVRQAELLAL QGTTDEAVNQ RLRDLAALAG NASRRVRDLS HLLARPDVAH TQFEDLLYAQ LHQLEQTLGL TCELAIDHEF PAPTPEASGH LLRIIREAVV NAARHAGARR VWVDCVQQGG CVTISVSNDG RPLSDGVVSS DGLGFRQMRM RAELLDATLV LRATATGAVM ELSFAAVPAA SSTATPVAT
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