| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4243 |
|---|
| Symbol | |
|---|
| ID | 6207434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 5476434 |
|---|
| End bp | 5477450 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641693911 |
|---|
| Product | GDP-mannose 4,6-dehydratase |
|---|
| Protein accession | YP_001821116 |
|---|
| Protein GI | 182416050 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1089] GDP-D-mannose dehydratase |
|---|
| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0263773 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0307991 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAG CACTGATCAC GGGCATCACC GGCCAGGACG GGTCCTATCT GGCCGAGCTG
CTCCTTGCCA AGGGGTACGA AGTGCACGGC ATCATCCGCC GCGCCTCGAC CTTCAACACC
AGCCGCATCG ACCATCTTTA CCGCGATCCG CATGTGAACG GGGTAAAGCT GTTCCTGCAT
TATGGCGATC TCGCCGACTC GGTGCAGATG GTGAAGCTGC TCTACGAACT GCAGCCGGAC
GAGATTTACA ATCTCGGCGC GCAGTCGCAC GTGCGCGTGT CGTTCGACAT TCCAGAATAC
ACCGGCGACG TCGACGGGCT CGGCGCGCAG CGGATTCTCG AGGCGATCCG CGAGGCGGGG
CTGGTGAAAA AGGTCCGCTA CTATCAGGCG TCGTCGTCGG AGATGTTCGG CAAGGTCCAG
CAGGTGCCGC AGACCGAGAC CACTCCGTTC TGGCCGCGCT CGCCCTACGG CTGCGCGAAA
GTCTACGCCT ATTGGCTGAC GGTGAACTAT CGGGAAAGCT ACGCGCTGCA CGCGAGCAAC
GGGATCCTGT TCAATCACGA GTCGCCGCGC CGCGGCGAGA CCTTCGTCAC GCGCAAGATC
ACCCGCGCCG CCACGCGGAT CAAACTCGGG CTGCAGGACG CGCTTTACCT CGGCAACCTC
GACGCGCAGC GCGATTGGGG CTACGCGAAG GAATACGTCG AGATGATGTG GCTGATGCTG
CAGCAGGACC GACCCGACGA TTACGTGGTC GCCACCAACG AGACGCATTC GGTGCGCCAG
TTCTGCGAAA CGGCGTTCGG CTTGCTCGAC CTCGACTGGC AACGCTACGT GAAATACGAC
GACCGCTACG AGCGCCCCTC GGAAGTCGAT CTGCTGATCG GCGACCCGGC CAAAGCGCGC
CGACAGCTCG GCTGGGAACC CAAGGTGCGG TTCAAGGACC TGGTGAAGAT CATGGTCGAG
TCCGACCTCG AGTTGGCGAA ACGCGAACGA CAGATCAACG ACCTGCCGAA ATTGTGA
|
|---|
| Protein sequence | MKKALITGIT GQDGSYLAEL LLAKGYEVHG IIRRASTFNT SRIDHLYRDP HVNGVKLFLH
YGDLADSVQM VKLLYELQPD EIYNLGAQSH VRVSFDIPEY TGDVDGLGAQ RILEAIREAG
LVKKVRYYQA SSSEMFGKVQ QVPQTETTPF WPRSPYGCAK VYAYWLTVNY RESYALHASN
GILFNHESPR RGETFVTRKI TRAATRIKLG LQDALYLGNL DAQRDWGYAK EYVEMMWLML
QQDRPDDYVV ATNETHSVRQ FCETAFGLLD LDWQRYVKYD DRYERPSEVD LLIGDPAKAR
RQLGWEPKVR FKDLVKIMVE SDLELAKRER QINDLPKL
|
|---|
| |