Gene Oter_4239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4239 
Symbol 
ID6207947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5469929 
End bp5470954 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content63% 
IMG OID641693907 
Productpeptide chain release factor 2 
Protein accessionYP_001821112 
Protein GI182416046 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0696744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCAC CCACGTTCTG GGATAGCAAC GAGCGCGCGC AGAAACACAT CGCGAAACTG 
AACGGCCTCA AGAAGGCCGT GCTGCCCGTC GTCGCCTTCC ACAAAAAAGT CGAAGACCTC
GACGTCATGG TCGAGCTCGT CGAAGCGGCC TCGGAAGGGG AGCGCGAGAG TTACGCGCAG
GAACTCGACA GCAATGTGAC CGCGATGGTC GAGGAACTCG ACGCACTGGA GATCGCGTCG
TTCCTGACCG GCCAATTCGA TCGCAACAAC GCGATCCTCT CGATCCAGTC CGGCGCCGGC
GGCACCGAGT CGAACGACTG GGCCGACATG CTTTTCCGCA TGTACAACCG CTGGGCGGAA
CGCCGCGGCT TCAGCATCGA GGTGCAGGAC GTCCAGGCCG GCGACCAGGC GGGCATCACC
AAGGCCACGC TCCTGATCAA AGGCGAAAAC GCCTACGGCT ACGCCAAGGC CGAGCGCGGC
GTGCACCGCC TCGTGCGCAT CAGTCCGTTC GATGCGAACA AGCGCCGCCA CACGTCGTTT
TGCGCCGTGG ACGTGGTCGC GGAAATCACC GAGGACGTCG ACGTCGAGAT CAACGAGAAC
GATCTTCGCA TCGACGTCTA TCGCTCCTCC GGCAAAGGCG GTCAGGGCGT GAACACGACC
GACTCGGCCG TGCGGATCAC GCACCTGTCG TCCGGCATCG TCGTGGTCTG CCAAAACGAA
CGTTCGCAGC TCAAGAACAA GGCGGCGGCG ATGAACGTCC TCAAGGCGCG GCTCTACGAA
AAGAAACAGG ACGAGCAGCG CGCGGAGATG GACAAGTTTT ACGGCGAGAA AGGCGAGATC
GGCTGGGGCG CACAGATCCG CTCCTACGTG CTGCAGCCCT ACCAAATGGT AAAGGACCTG
CGCACGGGCG TGAGCACCAG CGACACGCAG GGCGTGCTCG ATGGCGACCT CGATCGCTTC
GTCAATGCCT GGCTGCGCGC CGGCTGCCCG CGCCACCGCA ACAAGGAAAT CCAGATGGAG
GAATAG
 
Protein sequence
MGAPTFWDSN ERAQKHIAKL NGLKKAVLPV VAFHKKVEDL DVMVELVEAA SEGERESYAQ 
ELDSNVTAMV EELDALEIAS FLTGQFDRNN AILSIQSGAG GTESNDWADM LFRMYNRWAE
RRGFSIEVQD VQAGDQAGIT KATLLIKGEN AYGYAKAERG VHRLVRISPF DANKRRHTSF
CAVDVVAEIT EDVDVEINEN DLRIDVYRSS GKGGQGVNTT DSAVRITHLS SGIVVVCQNE
RSQLKNKAAA MNVLKARLYE KKQDEQRAEM DKFYGEKGEI GWGAQIRSYV LQPYQMVKDL
RTGVSTSDTQ GVLDGDLDRF VNAWLRAGCP RHRNKEIQME E