| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4229 |
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| Symbol | |
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| ID | 6207744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5454785 |
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| End bp | 5456065 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641693897 |
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| Product | hypothetical protein |
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| Protein accession | YP_001821102 |
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| Protein GI | 182416036 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.527328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.405756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAA AACTCGTTTC CCTACTCGGC GCCGGGGTGT TTGCCCTGAG CGCTTTGGCC
GGCTCCCTCG CCGCGGCTGA GACCGTCAAG GTCGGCGTGC TGCATTCGCT CAGCGGCACC
ATGGCGATCA GCGAAACCTC GCTGCGCGAT GTGCTGCTGT TCGCCTTCGA CGAGATCAAC
GCGCAAGGCG GCGTGCTGGG CCGGCAGATC GAGCCGGTCG TCGTCGACGG CGCATCCAAC
TGGCCGCTGT TCGCCGAAAA GGCGAAGCAG CTGCTGGAGC AGGACCAGGT CGCCGTCGTG
TTCGGCTGCT GGACGTCCGT AAGCCGCAAG TCCGTGCTGC CGGTGTTCGA GAAAAACAAC
GGGCTGCTGT TCTACCCCGT CCAATACGAG GGCGAGGAGG AAAGCCAGAA CGTCGCCTAC
ACCGCCGAAG CGGTGAACCA GCAGGCGACG CCGGCGGTCG ACTACTATCT CGCCGAGGGC
AAGACGAAGT TCTACCTGCT CGGTTCGGAT TACGTTTATC CGCAGACCAC CAATCTCGTG
CTGCTCGAAT ATCTGCTGAG CAAGGGCGTG CCGCTCGAGA ACATCGGCGG TGGCTTCAAG
CGCGACGAGT CGGGCCGAAT CATCTCCGCC GGCAAATACA CGCCGTTCGG CCACACCGAC
TACCAGCAGA TCGTCGCCGA GATCAAACAG TTCGCCGCCT CCGGCGACGC CTGCGTCATC
AGCACGCTGA ACGGCGACAC GAACGTTCCG TTCTTCAAGG AGTACGCCGC GGCGGGGCTG
ACGTCCGACA CCTGCCCGGT GGTGTCGTTC TCGATTTCGG AGGATGAATT TCGCGGCCTG
CCGGCGAAGC AGCTCGTCGG TCAGCTGGGC TGCTGGACGT ATTTCCAGTC GCTCGATACG
CCGGCCAACA AGCAGTTCGT CGGCGCATTC CAAAAGTGGC TGGGCACGAC GAAGGTGCCG
GGCATCGTGA AGGAGGGCCG CGTGACCTGC TCGCCGATGG TGCTGAGCTA CGCCGGCGTG
CATCTCTGGA AGGCCTGCGT CGAAAAGGCG GGAACCTTCG ACGTCGACGC GGTGCGCGCC
GCGTGGAAGA GCGGCGTGTC GTTCGACGGG CCGGGCGGCC GCGTGACGAC GCAGCCCAAC
ATGCACCTCA CGAAAAACGT CTACATCGGC GAGACGCGCG CCGACGGCCA GTTCAAGATC
GTGAAGTCGT TCGACAACGT CGTCGGCGAG CCGTGGCTCA AGGGCAAGTT CAAGGCCGCG
GCCGTCGCGA CGGCCCAGTA G
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| Protein sequence | MTKKLVSLLG AGVFALSALA GSLAAAETVK VGVLHSLSGT MAISETSLRD VLLFAFDEIN
AQGGVLGRQI EPVVVDGASN WPLFAEKAKQ LLEQDQVAVV FGCWTSVSRK SVLPVFEKNN
GLLFYPVQYE GEEESQNVAY TAEAVNQQAT PAVDYYLAEG KTKFYLLGSD YVYPQTTNLV
LLEYLLSKGV PLENIGGGFK RDESGRIISA GKYTPFGHTD YQQIVAEIKQ FAASGDACVI
STLNGDTNVP FFKEYAAAGL TSDTCPVVSF SISEDEFRGL PAKQLVGQLG CWTYFQSLDT
PANKQFVGAF QKWLGTTKVP GIVKEGRVTC SPMVLSYAGV HLWKACVEKA GTFDVDAVRA
AWKSGVSFDG PGGRVTTQPN MHLTKNVYIG ETRADGQFKI VKSFDNVVGE PWLKGKFKAA
AVATAQ
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