| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4228 |
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| Symbol | |
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| ID | 6208456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5452867 |
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| End bp | 5454522 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641693896 |
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| Product | urea ABC transporter, permease protein UrtB |
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| Protein accession | YP_001821101 |
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| Protein GI | 182416035 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0420008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.435357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCGC AGGAATCGGC GCGGCAGACG ATCGCGCGGG CGATCCTCGC CGAGGCGCCG
GCGCAGCGGA TGGAACTGAT CCGCGCGCTG GCCGGCGAGG CTGATGCGGC GATCGGGCCG
CTGCTCGCGG CGTGGCGCGA GGACGCGCTC TTCGTCGCCA CGACGGCCGC GGGGGAACGC
GTGCCGGTCA CGCTCGAGGG GGAACCGGAG GCCAACGGCC GCCGGCGCGC CCGGCGCGTC
GACACGGGCG AACTGCTGCT GGACGCCAGT GACGGGCCGG CGCGGCTGGC GCCGGGCTCG
CTCGTACCGG TGGAGCACAC GGCGGCACTG CGGCGCGTGA TGAAAACCGT GCTCGATGTC
GCTGATCTCG CGCATCCGGA GGCGGCGCGG CGCATTCGCG CTATCCGGAC GTTCGGCTAC
GGTCAGCAGC TCGACAAGCT ATTCGCCTTG GAGGCCCGGC AGCGGATCGA GCAGACCGCG
GGCGTGCAGC TGGCGCTGCG CGAGGCCATC GCGCTGATCC AGCTCAAGCA TGCGCCGCGC
GACGGCCGGC TCGCGGCCCT GCGGGAACTC CAGGCGCTGC ACACGATCGG CAGCGCGGAT
GCGATCAAGC TCGCGGCGAA GTCCCCCGAG ATCGCGGGCG ATCCGGCGCT CGCCGCCGCC
GCACGCTCGG CGTTGCGCGC GATCGACGAA CACGTCACCG CGGTGAATTT TTTCGGAACG
CTGTTTCGCG GGCTGAGCCT CGGCAGCATT CTGCTCGTGG TTGCGCTGGG GTTGGCGATC
ACGTTCGGCC TGATGGGCGT GATCAACATG GCGCATGGCG AGATGATCGC GGTGGGCGCC
TACACGACGT ACGTCGTGCA AAATCTATTT GGCGCCGGGC TGGCCCTGTC GCCGTTCGGC
TGGTCGATCA GCCTGCCCGG ACTCAACGCG CAGGGCTGGA GATACGAAGG TTATTTCCTG
CTCGCGCTGC CGCTGAGCTT TCTCGCCGCG GCGGCGATGG GCCTGTTGCT CGAGCGCGGC
GTGATCCGGT TTCTTTATCG CCGCCCGCTC GAGAGCCTGC TCGCCACGTG GGGCGTGTCG
CTCGTACTGC AGCAGCTGTT CCGGCGGGTC TTCGGCTCCA ACAACGTGCA GGTGAGCAGT
CCCGCGTTCC TGAGCGGCAA CTGGACGTTC AACGACATCA TCTTCGGCTG GAATCGCGTC
TTCGTGATCG GGTTCGCCGG CGTGATCGTG CTGGGCGTGT GGCTGGTGCT CACGCGCACG
TCGCTCGGGC TGCTGATTCG CGCGGTGATG CAGAACCGCG CGATGGCGGC CTGCCTCGGC
GTGCGGACCG AGCGGGTGAA CATGGCGACC TTTGCGCTCG GCAGCGGACT CGCGGGGCTG
GCGGGAGCGT TCCTCAGCCA GATCGGCAAC GTCGGGCCGT CGCTCGGCCA GAGTTACATC
GTCGACAGCT TCATGACCGT GGTCGTCGGC GGAGTCGGCA ACCTCGCGGG CACCGTCCTC
GCCGCGCTGG GCATCGGGAT GTCCGACCAG ACGCTCCAGC AGCTGCTGCT AAATCCGGTG
CTGGGAAAAA TTACCGTGCT GATCGCGATC ATCCTGTTTT TGCAGTGGCG GCCGGCGGGA
ATCTTCGTCA CGCGCAGCCG CAGCCTGGAG GGTTGA
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| Protein sequence | MAAQESARQT IARAILAEAP AQRMELIRAL AGEADAAIGP LLAAWREDAL FVATTAAGER
VPVTLEGEPE ANGRRRARRV DTGELLLDAS DGPARLAPGS LVPVEHTAAL RRVMKTVLDV
ADLAHPEAAR RIRAIRTFGY GQQLDKLFAL EARQRIEQTA GVQLALREAI ALIQLKHAPR
DGRLAALREL QALHTIGSAD AIKLAAKSPE IAGDPALAAA ARSALRAIDE HVTAVNFFGT
LFRGLSLGSI LLVVALGLAI TFGLMGVINM AHGEMIAVGA YTTYVVQNLF GAGLALSPFG
WSISLPGLNA QGWRYEGYFL LALPLSFLAA AAMGLLLERG VIRFLYRRPL ESLLATWGVS
LVLQQLFRRV FGSNNVQVSS PAFLSGNWTF NDIIFGWNRV FVIGFAGVIV LGVWLVLTRT
SLGLLIRAVM QNRAMAACLG VRTERVNMAT FALGSGLAGL AGAFLSQIGN VGPSLGQSYI
VDSFMTVVVG GVGNLAGTVL AALGIGMSDQ TLQQLLLNPV LGKITVLIAI ILFLQWRPAG
IFVTRSRSLE G
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