| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4226 |
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| Symbol | |
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| ID | 6207629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5450839 |
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| End bp | 5451612 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641693894 |
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| Product | urea ABC transporter, ATP-binding protein UrtD |
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| Protein accession | YP_001821099 |
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| Protein GI | 182416033 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
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| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0369826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.231992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTTG CCGCCGAAAA AACGAATCTC CTGCTGCTCG TCGAGGACGT GAGCAAGACG
TTCGATGGGT TCAAGGCCAT CTCGAACCTG ACCTTCTACC TCGACCGGGG CGAACTACGG
ACGGTCATCG GCCCCAACGG CGCGGGCAAG TCGACGTTCT TCGATCTGAT CACCGGCCGG
GCGAAGCCGG ATACTGGTCG GATTGAGTTT GGCTGGAACA CCGATCTCAC CGGGATGAAC
GAGTATCAGA TCAACCGGCT CGGGATCGGG CGGAAGTTTC AAACGCCCTC GGTGTACGCC
GAGCACACCG TGTTCGAGAA CCTGCTGCTG TCGCTGCAGG GTCCGCGCGG CGTGTTCGCG
ACGCTGTGGC ATCGCCCCAC GTCGACCGAG CGCGACCGGA TCGACGCGCT GCTGCGTACG
GTCCGGCTCG AGGCGAAGCG CGCGGTACCG GCGGGCCGGC TGGCGCACGG CGAGAAGCAG
TGGCTCGAGC TCGGCATGCT GCTGGCGCAG GATCCGCAAT TGCTGCTGGT GGACGAACCG
GCCGCGGGGA TGACCGATGA TGAAACGGCG CGCACCGGCG ACCTGCTGAT CAGCCTCGCG
GAGAAGCACA GCATCATCGT CGTCGAGCAC GACATGACCT TCGTGCGGCA GATTGCCCGC
GACGGCAAGG TCACCGTGCT GCATCAGGGC ACCGTGCTGT GCGAAGGCCG GTTCGACGAG
GTGCAGGCCG ACGAACGCGT GCGCGAGGTT TACCTCGGGC GGGGAAAACA CTGA
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| Protein sequence | MKLAAEKTNL LLLVEDVSKT FDGFKAISNL TFYLDRGELR TVIGPNGAGK STFFDLITGR
AKPDTGRIEF GWNTDLTGMN EYQINRLGIG RKFQTPSVYA EHTVFENLLL SLQGPRGVFA
TLWHRPTSTE RDRIDALLRT VRLEAKRAVP AGRLAHGEKQ WLELGMLLAQ DPQLLLVDEP
AAGMTDDETA RTGDLLISLA EKHSIIVVEH DMTFVRQIAR DGKVTVLHQG TVLCEGRFDE
VQADERVREV YLGRGKH
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