| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4225 |
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| Symbol | |
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| ID | 6205233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5449972 |
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| End bp | 5450745 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641693893 |
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| Product | urea ABC transporter, ATP-binding protein UrtE |
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| Protein accession | YP_001821098 |
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| Protein GI | 182416032 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.195928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.236776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTCGC TGCTTCAACT CTCTTCGGTC GAAGCCGACA TCGCCGGCTC GCGGATCCTG
CGGGGGGTGG AGCTTAACGT GAACACGGGC GAGGTCGTCG CATTGATGGG TCGCAACGGC
GTGGGCAAGA CCACGACGCT GCGGGGGATC GCCGGCCTGC TGCCGGTGCG CAGCGGGACG
ATCGTGTTCG ACGGCCGCGC CCTGCACAAA ACGCCGCCGG ACGTCCGGGC GCGGATGGGC
GTGGCCTACG TGCCCCAGGG GCGCGATATT TTCCCGCACC TCACGGTCGC CGAAAATTTG
GAGATCGGTC TGGTCGTGCA TCCGCGCAGC CGCGCGGCCG CTGCGGCGGC GCGCGAGCGC
GTGTTCAACC TGTTTCCGGT ATTGAAGGAA ATGCTGGGCC GAAAGGGCGG GGTGCTGTCC
GGCGGTCAGC AGCAGCAGCT CGCGATCGGG CGGGCGCTAT TGACGAATCC GCGGCTGTTG
ATGCTCGACG AGCCGACTGA AGGAATCCAA CCGTCCGTGA TCGATCACAT CGGGGACACG
CTGAAGAAAC TCAAGACGGA GGGGCTGCAC GAAAATCCGG TCGCGGAGAT CCAGCATGCG
ATCAAGGAAC TCAAGCGGGA GGGCTCGCTC GCGATCCTGC TCGTCGAGCA ATACGTCGAT
TTCTGCCGGG ACGTCGCGGA CCGTTTCTAC GCGATGGATC GCGGCGCGGT GGTGGCGCGC
GGTCCGATTG CCGCGCTGAG CGACGCTGTG GTGAAGCAGC ATCTGCAGGT ATGA
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| Protein sequence | MSSLLQLSSV EADIAGSRIL RGVELNVNTG EVVALMGRNG VGKTTTLRGI AGLLPVRSGT
IVFDGRALHK TPPDVRARMG VAYVPQGRDI FPHLTVAENL EIGLVVHPRS RAAAAAARER
VFNLFPVLKE MLGRKGGVLS GGQQQQLAIG RALLTNPRLL MLDEPTEGIQ PSVIDHIGDT
LKKLKTEGLH ENPVAEIQHA IKELKREGSL AILLVEQYVD FCRDVADRFY AMDRGAVVAR
GPIAALSDAV VKQHLQV
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