| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4204 |
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| Symbol | |
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| ID | 6204465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5430293 |
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| End bp | 5432377 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641693872 |
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| Product | transketolase central region |
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| Protein accession | YP_001821077 |
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| Protein GI | 182416011 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.578732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCGG CCCGCGATCT TCGCGCCGTA GAACTCGAGT CCCCTTCCTC TGAAACCCTG
CTGCAAATCT ACGCCTGGAT GCAGCTCGCG CGCACCGGCG ACAACCGCAT CCTCGATCTC
TTCCGCCAGG GCTTGATCAA GGGCACCGTC ACCGGCGGCC AGGGCAACGA GGGTCTGATC
GTCCCGCTCG CGCTGCTGGC CGACAAGGCG ATCGACGTCA CCTGTTTCAC GCACCGCGAT
CTCGGCGGAC ACCTGATCTG GAGCGGACAC CTCTGCCAGC ATCTCAACCA ATACTTCGCC
AACGCCGGCA GTCCGACCAA GGCTCGCGAG GGGAACGTGC ACCGCGGCGA TCCGAAGAAC
CGCTCGCTGC CGATGATCAG CCACCTCGGC GCGATGCTCG GCCCGGTGCT CGGGATGACC
GATTCGCAAC GCCGGCGCGG TCATCGCGCG GTCGGTTTCG CGTTTTTCGG CGACGGCTCC
TCCAGCACCG GCGACGTCCA CGAATCGCTC AACCTCGCCT CGCTGCTGAA CCTCCCGATC
CTGTTCGTGA TCGAGAACAA CTGCTACGCC TACTCGACGC CCATGTCGGA GCAGTTCTGC
GAGGGCACCG CTCTTTGGCG ACGCGCCGCG GGCTACGGGA TTGAAGGTCT CGCGCTCGAC
GCAACCACGG ACGTGGCCGC CACGGCCCGC ACGCTCGCCG CTGCGATCGA AAAGGTTCGC
TCCACCTCGC GACCGATGCT CATCGAGGCC CAGACGCTGC GGCTCCGCGG TCACGCGGCC
TACGACACGT GCGACTACCT GAAGCCCGGC GAAAGCGAGG GCTTCTTTGC GCGCGATCCG
CTGCCAAAAT TCCGTCAGCA GCTCGCCGCC GCCGGCCACG GCGCGCGGCT CGACGCCATC
GACGCGGAAC TGTCTGCTTT CATCGAAGCG TGCATCAAGG TTTCGCTCGC CGTCGAGCGG
CCTGCGGTTG ATGTCGCCGC CCTGCAGGCC GACGTGTTCG CTCCTGGCGC CGCTCCGCTG
CCGTGGAAAC CGGCCGTGCC GCCGCTGCCG ACGCTGCACG TCATCGCGCC TTCCGCGCCC
TCGCAGCCGC CCGTGGCGCA CGTCGAGTCC GGCACCACGC TCACGTTCGC CCAAGCCATC
ACCGCCGCGC TGCGGAAAAT TCTCGCCGAG CAGCCCGATG CGTTCGTGCT CGGCCAGGAC
ATCGGTACCT ACGGCGGTGC GTTCAAGGTC ACGGAAGGCT TGCTCAAGGA ATTCGGCCGC
AGCCGCGTGT TCAACACGCC GCTCGCGGAG AGCGCGTGCA CCGGCTACGC GGTCGGGATG
GCGCTGAACG GCCATCGGCC AGTCGAGGAA TTTCAGTTCG CCGACTTCGC CACCGAGGCG
ATCACGCAGA TCACGCTCAA CGCTGCCACG CTGCATTTCC GTTCCGGCGC CGCCTGCCCG
CTCGTGCTGC GGCTGCCCTG CGGCGGCGGC GTGACCCTCG GCTCGTTCCA CTCGCAGGAG
CTCGAGTCGT TCCTCCTCGC GATGCCCGGA CTCAAGGCGC TCTACCCAAG CAATCCGCAG
GACGCCTTCG ACGCGATGCT CGCGGCCTAC GAGGATCCCA ATCCCGTGCT GTTCTTCGAG
CACAAGGGCC TCTACCGCCG GCTCAAGCAA GCGGTCGTCT GGAACCCCAA CTACCGCGAT
GTCTGGCAGC CGAAACAGCT CCGCACCGGC GACTACGCCA CGGTCGTGAG CTACGGCGAG
ATGGTGCACC TCGCGACCGA GGTGTGCGAT TACCTCGCCG CGGAATACGA GCACACGCTC
GATCTGTTCG ATCTGCGCTG TCTCTCGCCG TTGCGGCTCG ATGCGATCCA CGCCTCCGTC
GCGCGCACCG GCCGGCTGGT CGTGCTGCAC GAGGGCCGGC GGACGCACGG CTTCGGCGCT
GAGCTCGTCG CCCGGCTCAC CGAGCAAAAC TTCGCCACGC TCAAAGCCGC CCCGCTCCGG
ATCGGCTCGC TCGATATCCC GGTGCCGTTC GCGCCGGAAC TCGAACAGCG CTTCCGCCCA
ACGCTCGACT CGGTCATTGA GCAGGTGACC GCCTGGATGG GGTGA
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| Protein sequence | MLAARDLRAV ELESPSSETL LQIYAWMQLA RTGDNRILDL FRQGLIKGTV TGGQGNEGLI
VPLALLADKA IDVTCFTHRD LGGHLIWSGH LCQHLNQYFA NAGSPTKARE GNVHRGDPKN
RSLPMISHLG AMLGPVLGMT DSQRRRGHRA VGFAFFGDGS SSTGDVHESL NLASLLNLPI
LFVIENNCYA YSTPMSEQFC EGTALWRRAA GYGIEGLALD ATTDVAATAR TLAAAIEKVR
STSRPMLIEA QTLRLRGHAA YDTCDYLKPG ESEGFFARDP LPKFRQQLAA AGHGARLDAI
DAELSAFIEA CIKVSLAVER PAVDVAALQA DVFAPGAAPL PWKPAVPPLP TLHVIAPSAP
SQPPVAHVES GTTLTFAQAI TAALRKILAE QPDAFVLGQD IGTYGGAFKV TEGLLKEFGR
SRVFNTPLAE SACTGYAVGM ALNGHRPVEE FQFADFATEA ITQITLNAAT LHFRSGAACP
LVLRLPCGGG VTLGSFHSQE LESFLLAMPG LKALYPSNPQ DAFDAMLAAY EDPNPVLFFE
HKGLYRRLKQ AVVWNPNYRD VWQPKQLRTG DYATVVSYGE MVHLATEVCD YLAAEYEHTL
DLFDLRCLSP LRLDAIHASV ARTGRLVVLH EGRRTHGFGA ELVARLTEQN FATLKAAPLR
IGSLDIPVPF APELEQRFRP TLDSVIEQVT AWMG
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