| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4196 |
|---|
| Symbol | |
|---|
| ID | 6208665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 5422738 |
|---|
| End bp | 5423904 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641693864 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001821069 |
|---|
| Protein GI | 182416003 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGCT GCGCCATCGC TTTGTTCGCA CTGGGTTTTA GTTGCGCGGT TCAGCTCCGC
GCCGCTGATG AGTCGCCCTA CGCCGTGGCC GCGGATCTTT TCGCGCCGAA CTCCGCCGAC
CTGGGCCTGC AACCGATCCC CGGGGCGCGC ACGTTCACCG TCTTCCGCCC GGACGAGAAT
ACGGATCACT ACAGCAACGG CGCGGTGCTG ATCGCATTCA AGGAACGACT CTACGTGCAG
TGGCAGAGTT CACGGCAGGA CGAGGATTCG CCCGACACGT GGGTCGCCTA CAGCTCCAGC
ACGGACGGCG AGCGCTGGAC CGCGCCGCGT CCGCTCAGCC CGCCGAACTC CGGCGTGACG
ATGCACTCGA GCGGCGGCTG GTGGACGGAC GGCACCACGC TCGTCGCATT CGTCAACGTA
TGGCCCACGG GCTTCCAGTC GCGTACCGGG GGCCACGCCG TTTACCGACT CTCCACCGAC
GGCGAAACGT GGAGCGCCCC GCACCGCCTG CTCGCGCACG ACGGTCAACC GCTCGAAGGC
ATCATCGAAC AAGACCCGCA CGCCTACGAC GGCCGGCTTC ACACCGCTTT CCACGTCGCA
CCGGGTCTGA CCGCGCAGCC GCACTACACC GACGATCCAC TCGGCCTCCG CAGCTGGGTG
CGCGGTTCGA TGCCGCACCT GCCGCGCGAT GGCGCGACGA GCCGCGAGCT CGAGCCGAGC
CTTTTTCAAC GCGGCGCCGA GCTCGTGATG GTTTTCCGCG ACCAAGCGTC GACTTTTCGG
CAACTCGCCT CGGTAAGCCG CGATCGCGGC GAAACGTGGT CACTTCCCGC CGTCACCAAC
ATGCCCGACT CCCGTGCCAA ACAGAGCGCT GGCAATCTTC CCGACGGCAC CGTTTTTCTC
GTCAATGCGC CGCACGCCGG CCGCGAGCGC ATTCCGCTCG CCGCCACGGT GAGCCACGAT
GGCCGGCTCT TTGACCGCAG CTTCCTGCTC CGCAGCGCGC GCGACCTCCA GCCGTTGCGC
TATCCGGGGA AATTCAAACG GCCCGGCTAC CACTATCCCA AAAGCTTCGT CGCGAATGGC
TACCTTTACG TCGTCTACAC GACGAACAAG GAGGACGTGG AGCTGACGCG CGCTCCCCTC
GCCGCGCTCG AAAATAGCCC GCGTTGA
|
|---|
| Protein sequence | MRRCAIALFA LGFSCAVQLR AADESPYAVA ADLFAPNSAD LGLQPIPGAR TFTVFRPDEN
TDHYSNGAVL IAFKERLYVQ WQSSRQDEDS PDTWVAYSSS TDGERWTAPR PLSPPNSGVT
MHSSGGWWTD GTTLVAFVNV WPTGFQSRTG GHAVYRLSTD GETWSAPHRL LAHDGQPLEG
IIEQDPHAYD GRLHTAFHVA PGLTAQPHYT DDPLGLRSWV RGSMPHLPRD GATSRELEPS
LFQRGAELVM VFRDQASTFR QLASVSRDRG ETWSLPAVTN MPDSRAKQSA GNLPDGTVFL
VNAPHAGRER IPLAATVSHD GRLFDRSFLL RSARDLQPLR YPGKFKRPGY HYPKSFVANG
YLYVVYTTNK EDVELTRAPL AALENSPR
|
|---|
| |