Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4190 |
Symbol | |
ID | 6207712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5414552 |
End bp | 5417314 |
Gene Length | 2763 bp |
Protein Length | 920 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641693858 |
Product | 2-oxoglutarate dehydrogenase, E1 subunit |
Protein accession | YP_001821063 |
Protein GI | 182415997 |
COG category | [C] Energy production and conversion |
COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.133168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGC TTAATGTCTC CGCCAACGCC AATACCGCTG TGATCGAAGC GGCGTATGAG GCATGGCTCA AGCAACCCGA CTCCGTCGAT CCGACGTGGC GCGCCTTTTT CCAAGGCTTC ACGCTCGGCA CGAGCGGCGG ATCGCTCGGC ACGGAGGGCG CGAATCTTCG GATCATCGAC AGCTACAAGC AGGCGCAGGT CGGCCGGTTC ATCAACGCGC ACCGCGCCCA CGGCCATCTC CAGGCGCACC TCGACCCCTT GGGCGAGCCA CCGCCCGCGG ACCCGAAACT GACGCTGTCG TATTTCGGGC TCGACGAAAA CGACCTGGGC GAGTCCTTCA CGCTCACCAA CTTCAAGGGC GGCGGCCAGA TGAAGCTGCG GGACATCGTC GACGCGTTGC GGCAGACCTA CTGCGGCCAC ATCGGGGTCG AGTACATGCA CGTGCAGGAA CACGCCGCGC GCGAGTGGCT GCAGGTGCGG ATGGAGCAGA CGAACAACCA GCCGCGCTTC TCCCGCGCCG AGAAGATCCG GATCCTCCGC CGGCTCCACA AGGCCGAGCT GTTCGAAAAG TTTCTCCACA CGAAATACGT CGGCCAGAAG CGCTTCTCGG GCGAAGGCGC GGAGACCTTC ATCGCCGCGA TCGATGCGAT GCTCGAGAAA TGCCCCGAGC TCGGCGTCGA GGAGATCGTC ATGGGCATGG CGCACCGCGG CCGGCTCAAC GTCCTCACCT CGATCATGCG CAAGCCCTTC GAGGTGCTGT TCGAGCAGTT TTCGGAAAAC TACCTCCCCG AGTCCGTGGC CGGCGACGGC GACGTGAAAT ACCATCTCGG CTACGAGGCG ATTCTCGACA CGTCCTCGGG ACAAAAGGTC GAGATCCGGC TCGCGGCCAA TCCCTCGCAC CTCGAGATCG TCGATCCTGT GGTCGAGGGC AAGGCCCGCG CCCGCCAGCG CGTGCGCCAT GCCACCTCCG AGCGCCAGCG CGTCCTGCCG TTCCTCATCC ACGGCGACGC CGCGTTCGCC GGCCAGGGGA TCGTCGCCGA AACGCTCAAC TTCTCGCAGC TGCCCGGCTA CACCACCGGC GGCACCGTTC ACCTCGTCAT CAACAACCAG ATCGGCTTCA CCACGCTGCC GCACGAAGCG CGCTCGACGC GCTACTGCAC CGACGTCGCG AAGATGGTCG AGGCGCCGAT CTTCCATGTG AACGGTGACG ATGCCGAAGC CGTGTGCCTG GTCGCGCAGC TCGCGCTCGA GTTCCGCGTG CGGTTCCAGC GCGACGTCGT CATCGACATG GTCTGCTACC GCAAGCACGG CCACAACGAG GCCGACGAGC CCGCGTTCAC GCAGCCCGTG CTCTACCGCC AGATCGCCGC GCATCCGCTC GTCTCGTCCA TTCTCACCGA GAAGCTCGTG CGCGAGGGCA CGATCACGCC GGACGAAGCC GAAGCGATCA AGGCCGAGTA TACCGCCGCG CTCGAGGCGA ATTTCGAACG CGCCAAAGCC CGCGAAAAGG AAAAGGAAGG CGCGCGGAGC GTGCAGCAAT CCCAGGCGAT CGAACGCGAG AAGTTCAAGG GCTCCACCGC GTTCTTCCAA CCCGCCTATC GCCACTCCAC GATCGACACC GGCGCGGAGC CGGCGCTGAT CAACCGCGTG GTCGCGGGGC TCACGACGAT TCCGGGCAGC TTCAAGCTCA ACCCGAAGAT CCGCCGGTTC CTCGACAACC GCATCCGCGC GCATCGCGAA GGCGGGCCCA TCGACTGGGG TTTCGGCGAA GCGCTGGCGT TCGGCACGCT GCTGCTCGAC GGCACGCCGA TCCGGCTGAG CGGCCAGGAC TGCGAGCGCG GCACGTTCAG TCACCGCCAC GCCGTGCTCT ACGACGTCGA CACGCGTGAG CAATACGTCC CGCTGAAAAA CCTCGATCCG CAGCAGCCCG CGTTCTGCGT CTACAATTCG CTGCTCTCCG AAGCCGGCGT GCTCGGGTTC GACTACGGCT ACTCGATGGA CTACCCCCAG ATGCTCTGCA TCTGGGAGGC GCAGTTCGGC GATTTCGTCA ACGGCGCGCA GGTCGTGATC GATCAGTTTA TCGCGAGCAG CGAATCGAAG TGGCAGCGAG CCAGCGGCAT CGTGCTGCTG CTGCCGCACG GCTACGAGGG CCAGGGGCCG GAGCATTCCT CCGCGCGGCT CGAGCGTTTC CTCGGGCTGT GCGCCGAGGA CAACATCCAG GTGACCAACA TCACCACCCC GGCCAACTTC TTCCACCTGC TCCGGCGACA GATGAAACGC GACTTCCGCA AGCCGCTCGT CGTCATGTCG CCCAAATCGC TGCTCCGGCA CCCGGCGTGC GTTTCGCGAC TCGACGAATT CACCTCCGGC CGGTTCCAGG AGGTGCTGGA CGATCCGAAG CCGCCCGCCA AGGTCGAGCG GGTGATCTAC TGCAGCGGCA AGGTGTATTA CGATCTCTGT GACTTCCGCG ATCGCCACCA CCTCAACGAC GTCGCGATCG TCCGGATCGA GCAGCTTTAT CCGCTCCACC GCGACCGGCT CGCCGCGGTC GCCGACCGCT ACAACGGCGC GCGCATCGTG TGGTGCCAGG AAGAGCCGCA GAACATGGGC GCGTGGACGT TCATCGCGCC GCGCCTCGCG GAGATCTACG GCTTTCCGCC AAAATACGCC GGCCGCGACG CCGCCGCCTC ACCCGCGGTC GGGGCCCTCG CGCTGCACAA ATTCGAACTC AACGCGCTGC TCCAGGACGC GTTCAATATC TAG
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Protein sequence | MKPLNVSANA NTAVIEAAYE AWLKQPDSVD PTWRAFFQGF TLGTSGGSLG TEGANLRIID SYKQAQVGRF INAHRAHGHL QAHLDPLGEP PPADPKLTLS YFGLDENDLG ESFTLTNFKG GGQMKLRDIV DALRQTYCGH IGVEYMHVQE HAAREWLQVR MEQTNNQPRF SRAEKIRILR RLHKAELFEK FLHTKYVGQK RFSGEGAETF IAAIDAMLEK CPELGVEEIV MGMAHRGRLN VLTSIMRKPF EVLFEQFSEN YLPESVAGDG DVKYHLGYEA ILDTSSGQKV EIRLAANPSH LEIVDPVVEG KARARQRVRH ATSERQRVLP FLIHGDAAFA GQGIVAETLN FSQLPGYTTG GTVHLVINNQ IGFTTLPHEA RSTRYCTDVA KMVEAPIFHV NGDDAEAVCL VAQLALEFRV RFQRDVVIDM VCYRKHGHNE ADEPAFTQPV LYRQIAAHPL VSSILTEKLV REGTITPDEA EAIKAEYTAA LEANFERAKA REKEKEGARS VQQSQAIERE KFKGSTAFFQ PAYRHSTIDT GAEPALINRV VAGLTTIPGS FKLNPKIRRF LDNRIRAHRE GGPIDWGFGE ALAFGTLLLD GTPIRLSGQD CERGTFSHRH AVLYDVDTRE QYVPLKNLDP QQPAFCVYNS LLSEAGVLGF DYGYSMDYPQ MLCIWEAQFG DFVNGAQVVI DQFIASSESK WQRASGIVLL LPHGYEGQGP EHSSARLERF LGLCAEDNIQ VTNITTPANF FHLLRRQMKR DFRKPLVVMS PKSLLRHPAC VSRLDEFTSG RFQEVLDDPK PPAKVERVIY CSGKVYYDLC DFRDRHHLND VAIVRIEQLY PLHRDRLAAV ADRYNGARIV WCQEEPQNMG AWTFIAPRLA EIYGFPPKYA GRDAAASPAV GALALHKFEL NALLQDAFNI
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