Gene Oter_4188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4188 
Symbol 
ID6208468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5413699 
End bp5414124 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content66% 
IMG OID641693856 
Producttranslation initiation factor SUI1 
Protein accessionYP_001821061 
Protein GI182415995 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCA AGGACAAAGT TCCAACCGAT GGCGGCGGCG CGCTCGGCCA AAATCCGTTC 
GCCGCGCTCA GCAGCGCTGG ATTAGCGCCA GCGAATCCAG CCCGGCTTGT AGCCGGGGCC
GCTGGCCCCG GACCGGGCTC AGCGAGCCCG GCTGCAACAA AATCGGCTGA GCCGGCAAAA
AACCGCGGGC GCGTCGACAT CAAGCGCGAG ACCGGTGGGC GGGGCGGAAA GACGGTGACC
GTCGTCAGCG GATTTGTAGG CATCGGCCTG CCCGAGAAAG AGCAACTCGC GAAAAAGATG
CGCGCGGCAT GCGGCTGCGG GGGAACGGTG AAAGATGGCC AGATCGAAAT CCAAGGCGAT
CAGCGCGAGA CCGTGGCGCG GATCCTGAGC GAGGCCGGTT TCCGGCCCGT GTTTGCGGGC
GGATAG
 
Protein sequence
MAAKDKVPTD GGGALGQNPF AALSSAGLAP ANPARLVAGA AGPGPGSASP AATKSAEPAK 
NRGRVDIKRE TGGRGGKTVT VVSGFVGIGL PEKEQLAKKM RAACGCGGTV KDGQIEIQGD
QRETVARILS EAGFRPVFAG G