Gene Oter_4187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4187 
Symbol 
ID6206982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5412708 
End bp5413586 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content64% 
IMG OID641693855 
Product5,10-methylenetetrahydrofolate reductase 
Protein accessionYP_001821060 
Protein GI182415994 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID[TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCCCG ACCGGCCCAT CGCCGAACTC TTCGCCACGC GCCGCCCGGT GCGCTCGCTG 
GAGTTTTATC CGCCCAAGGA CGCGGCCGGC GTTGAGGCGC TGCGCGCCAC CGCGCATGCG
CTGCGGCGGA TGCTGCCCGA TTTTGTCTCG GTGACCTATG GCGCCGGCGG CAGCACCCAG
GAGCGGACCG CGCAGGTGAG CTCAATCCTG CGCAAGGATT GCGGCTTCAC CGTCATGCCG
CACCTCACGT GCGTCGGACA CTCGCAGCTG GAACTCGCCG CGCTTGCCGA CGGTTTCCAC
GACCACGGTT TCCGGAACAT CATGGCCTTG CGTGGCGACC CGCCCAAAGG CTCGGCGCAA
TTCACACCGC AGCCAGACGG ACTCCGCTAT GCCGCCGATC TGGTCACGCT GCTGAAATCG
CGGCACACTG ATTTTTGTCT CGGTGTCGCC GGCTATCCGG AAAAACATCC CGAAGCCGCT
TCGCTCGACG TGGATCTCAC CAACCTGAAA CGCAAGGTCG ATGCCGGGGC CGATTTCATC
ACCACGCAGC TCTTCTTTGA CAACACGGTC TACTACCGCT TCGTCGAAAA ATGTCGCGCC
GTGGGGATCA CAGTTCCGAT CGTGCCCGGG ATCATGCCCG TACTCTCCCT GCACCAGATC
CAACGGTTCA CGGCGATGTG CGGTGCCACG CTGCCGAAAC AGCTCATCAC CCGGCTCGAA
GTCGCGGCGG AGAACACCGA TGTGGTCGAG ACGATCGGCA TCGACTGGGC GTTGACACAG
ATCCGCGGTC TGCTCGCGAA CGGTGCGCCG GGTTATCACC TCTACGTGCT GAACCGCGCG
AAAGCCGCGC TCGCCCTCAC CGCCGGGCTC GCCGCATAG
 
Protein sequence
MLPDRPIAEL FATRRPVRSL EFYPPKDAAG VEALRATAHA LRRMLPDFVS VTYGAGGSTQ 
ERTAQVSSIL RKDCGFTVMP HLTCVGHSQL ELAALADGFH DHGFRNIMAL RGDPPKGSAQ
FTPQPDGLRY AADLVTLLKS RHTDFCLGVA GYPEKHPEAA SLDVDLTNLK RKVDAGADFI
TTQLFFDNTV YYRFVEKCRA VGITVPIVPG IMPVLSLHQI QRFTAMCGAT LPKQLITRLE
VAAENTDVVE TIGIDWALTQ IRGLLANGAP GYHLYVLNRA KAALALTAGL AA