Gene Oter_4184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4184 
Symbol 
ID6206242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5408582 
End bp5409352 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content62% 
IMG OID641693852 
ProductABC-2 type transporter 
Protein accessionYP_001821057 
Protein GI182415991 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.37094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGAC CGAGGGCGGT CGCGCTCCTA CCCATCCACT TCGCCATGCG CCAGATTACT 
CCCGTCTTCA AACGCGAATT CCTCGGCTAT TTCCGCTCGC CCGTCGCCTA CGTGGTGCTG
GTGGCGTTCC TCGTTCTCTC CGTCTCGCTC GCCTTCTCGC GGTTCGGCGG ATTTTTCAAG
GCCGGCACCG CCGGACTCGA GAGTTACTTC GTCTTTTTCC CGTGGCTGTT CCTGTTTGTT
GTGCCCGCCG TCGGCATGCG GCTCTGGGCC GAGGAGCGTC GTTCGGGCAA CGTGGAGCTG
CTGTTCACGC TGCCGATTAC CACGCTCGAA GCGGTGGTGG GAAAGTTTCT TGCCGGCTGG
GCATTCCTCA CCGTCGCGGT GCTGCTGAGT TTCCCAATGG CGATCACCGT CGCGTATCTC
GGCGACCCCG ACTGGGGCGT GATGATCAGC ACCTATCTCG GCACGATCCT GATGGCCGGC
GGTTACCTCG CCGTGTGCGC GCTGATGTCC TCCCTGACCA AGAATCAGGT GATCGCGTTC
GTGCTCGGGC TGATCGTCTG CGCCGTGCTG CTGTTCCTGG GCTACAGTGG CTTCACCGAG
GTGCTCCAGA GCGTGTTCCC GGTCGCGCTC GCCGATGCGT TCGCGAACTT CAGTTTCATC
ACCCATTTCG ACGCCTTCAC CAAGGGCATC GTTGATCCGC GTGACCTGAT GTTCTTCGTC
TCGTTGATCG GCTTCACCCT CTTCCTCAAC GTGGTCGCAC TCGAGCGCTA G
 
Protein sequence
MMRPRAVALL PIHFAMRQIT PVFKREFLGY FRSPVAYVVL VAFLVLSVSL AFSRFGGFFK 
AGTAGLESYF VFFPWLFLFV VPAVGMRLWA EERRSGNVEL LFTLPITTLE AVVGKFLAGW
AFLTVAVLLS FPMAITVAYL GDPDWGVMIS TYLGTILMAG GYLAVCALMS SLTKNQVIAF
VLGLIVCAVL LFLGYSGFTE VLQSVFPVAL ADAFANFSFI THFDAFTKGI VDPRDLMFFV
SLIGFTLFLN VVALER