Gene Oter_4180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4180 
Symbol 
ID6207781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5404983 
End bp5405414 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content63% 
IMG OID641693848 
Producthypothetical protein 
Protein accessionYP_001821053 
Protein GI182415987 
COG category[S] Function unknown 
COG ID[COG5478] Predicted small integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC CTTCGTTCTC CGTCTGGTTC ACGAGCTTCG CCAAAATTAC CGCCCGCGCC 
ACCGGTCGAC CTTCGGCCTT CGTGCTCGCG TTCGCCGTCA TCCTCGCCTG GGCCGTCACC
GGTCCGCTGT TCCACTACAG CGACACGTGG CAGCTCGTGA TCAACACCGG CACGACGATC
GTCACCTTCC TCATGGTGTT CCTGATCCAG AACACCCAAA ACCGCGACAC CCAGGCGATC
CAAGTAAAGC TGGACGAACT GATCCGGGCC ATGGAGGGGG CGCACAACGC GCTGCTCAAT
CTCGAGGATT TGACCGACGA GGAGCTCGAG CAAATCCGCG CCGATTACGC CAAGCTCGCC
ACCCAGGCCC GCAAGGACCT GCGCCACGGC CGCTCGGATA CGGCGGTCCG CCGTGTGCAG
CACGCCCGCT GA
 
Protein sequence
MKTPSFSVWF TSFAKITARA TGRPSAFVLA FAVILAWAVT GPLFHYSDTW QLVINTGTTI 
VTFLMVFLIQ NTQNRDTQAI QVKLDELIRA MEGAHNALLN LEDLTDEELE QIRADYAKLA
TQARKDLRHG RSDTAVRRVQ HAR