| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4179 |
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| Symbol | |
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| ID | 6207819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5403191 |
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| End bp | 5404858 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641693847 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001821052 |
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| Protein GI | 182415986 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTCAG CTCCTGTTAC CAAATACCGT CCGTTCCCTC CGGTCGATTT GCCGAACCGG
CAATGGCCCA ATCGCACGAT CACCCGCGCC CCGATCTGGT GCAGCGTCGA TCTCCGCGAC
GGCAACCAGG CGCTCGCCCA ACCGATGAGC GTCGAGGAGA AGCTCGAGTA TTTCGAAATG
CTGGTGAAAA TCGGCTTCAA GGAAATCGAG GTCGGTTTCC CCTCCGCGTC GCAAATCGAG
TTCGATTTCT GCCGTCGGCT GATCGAGGAG AACCGGATCC CCGCCGACGT TTGGATCCAG
ATCCTCTGCC AGTGCCGCGA GGACCTGATC ACGCGCTCGC TCGAAGCACT GCATGGCGCC
AAGCGGGTGA TCTTCCATCT CTATAACTCC ACCTCGCCCG CCCAACGCCG CTACGTCTTC
AACGCCGAGC GGCCCGCCAT CCGGGACATC GCCACGCACG CCGTGTCGTT CCTCAAGTCC
CGCATGGCCC CGCTCGTCGC CCAGGGGACC CACATCCGGC TGGAGTACTC ACCCGAAAGC
TTCACCAGCA CCGAGCTCGA TTTCGCGCTC GAGGTCTGCG AAGCGGTCAC CGACATCTGG
CAGCCCACCA CGGCGGAGAA GATCATCCTC AACCTGCCCG CGACCGTCGA ATACGCCACG
CCCAACGTCC ACGCCGACCA GATCGAGTGG ATGTGCACGC ACCTGACGCG CCGCGATCGC
ACGATCATCT CGCTCCACAC GCACAACGAC CGTGGCACGG GCGTGGCCGC CACCGAGCTC
GGCATGCTGG CCGGCGCCGA CCGCGTCGAA GGCACGCTCT TCGGCAATGG CGAGCGGACC
GGCAACCTGG ATATCGTCAC GGTCGCACTG AACCTCTACA CGCACGGCAT CCACCCGGAC
CTGGACTTTT CGGACATCAA CGACATCCGC GAGGTCTACG AGCGCTGCAC GCGGCTCGAG
GTGCCGGCCC GGCAACCGTA TGCCGGCGAA CTCGTCTTCA CGGCGTTCAG CGGCTCGCAT
CAGGACGCGA TCAAGAAATC CTGGGACACC CGTAAGTCCA CCGAGCCGTG GGATGTGCTC
TACATTCCGA TCGATCCCGC CGACGTCGGT CGCAGCTACA AGGCGATCAT CCGGATCAAC
AGCCAGTCGG GCAAGGGCGG CGTCGCCTAC GTGCTTGAGC ACGAGTTCGG CTACCAGTTG
CCGAAGCTCA TGCACAAGGA GATCGGCCGG CTCATCAACG ATCTGGCGGA CGCGACCGGC
CGCGAGCTCA CCGCGCCGGA GATCCACGAT GCCTTTCAGC AGGAATACCT GCAGCGCACC
GCGCCCGTCG TCCTCGAGAC CTTCAAGACC ACTGAGCGCA ACAGCACGGT GAAGTGCGAC
GCGAAGATCA GCATCGACGG CCAGGCCCGG AAGCTCACCG CCGAAGGTAA CGGTCCGATC
GATGCCTTTG TGCGTGCGCT CGCGGAAACC GCGCTGCCGA AGTTCGAGGT GTTGAGCTAC
GCCGAGCACT CGCTCGGCAA GGGCGCGGAA GCGCGCGCGG TCTCCTATAT CCAGGTCAAG
ACCGAGCGCG GCCACACGCT CTTCGGCGCG GGCGTCGACA CCAACATCGA GCTCGCCTCG
ATCAAGGCGA TCGTCAGCGC GCTCAATCGC ACTCTGGCGA AGCGGTAA
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| Protein sequence | MQSAPVTKYR PFPPVDLPNR QWPNRTITRA PIWCSVDLRD GNQALAQPMS VEEKLEYFEM
LVKIGFKEIE VGFPSASQIE FDFCRRLIEE NRIPADVWIQ ILCQCREDLI TRSLEALHGA
KRVIFHLYNS TSPAQRRYVF NAERPAIRDI ATHAVSFLKS RMAPLVAQGT HIRLEYSPES
FTSTELDFAL EVCEAVTDIW QPTTAEKIIL NLPATVEYAT PNVHADQIEW MCTHLTRRDR
TIISLHTHND RGTGVAATEL GMLAGADRVE GTLFGNGERT GNLDIVTVAL NLYTHGIHPD
LDFSDINDIR EVYERCTRLE VPARQPYAGE LVFTAFSGSH QDAIKKSWDT RKSTEPWDVL
YIPIDPADVG RSYKAIIRIN SQSGKGGVAY VLEHEFGYQL PKLMHKEIGR LINDLADATG
RELTAPEIHD AFQQEYLQRT APVVLETFKT TERNSTVKCD AKISIDGQAR KLTAEGNGPI
DAFVRALAET ALPKFEVLSY AEHSLGKGAE ARAVSYIQVK TERGHTLFGA GVDTNIELAS
IKAIVSALNR TLAKR
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