| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4178 |
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| Symbol | |
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| ID | 6208006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5402228 |
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| End bp | 5402818 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641693846 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001821051 |
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| Protein GI | 182415985 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACG ACGCGCCCTT CGATCTCGCC GGCTGCCTCG ACCGGGTTCG GCAGCGCGAC
CAGGTCGCCG CGCGCGAACT CGTCGAACAT CTTTATCCGC TCGTCATCCG CATCGTGCGG
GGACGACTGC CTCGACGTGT CTCGGAGGAG GACCTCGCCC AGGAAATTTT TCTGAAAATG
TTTTCCCGGC TGGAACAGTA TGGCGGCAGC GTGCCGTTCA CCCATTGGGT GTCGCGGATC
GCGGTGACGA CCTGCATCGA CCACCTGCGC GCGCAGCAGC GGCGGCCGGA GTTCCGTTGG
GCGGACTTGT CGGAAAACGA GGCCAAGGTG CTCGACTCCG TGTTGACGAA CGAGGACGCG
GCGGCGCCGG ACGATGCGCT GGCAGCGCAC GAGCTCGTGC ACAAGCTGCT CGATCAGCTC
AAACCGCAGG ATCGTCTCGT GCTGCAGTTG CTGGATCTCG AGCAGAAGAC GATTGCCGAG
ATCAGCGCGC TCACGGGGTG GAACACCTCG CTGGTGAAAG TGCGTGCATT TCGCGCACGA
CGGAAGTTGC AGAAGCTCTT CCAGGATCTT AAACGAAAGG AACGATCATG A
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| Protein sequence | MSDDAPFDLA GCLDRVRQRD QVAARELVEH LYPLVIRIVR GRLPRRVSEE DLAQEIFLKM
FSRLEQYGGS VPFTHWVSRI AVTTCIDHLR AQQRRPEFRW ADLSENEAKV LDSVLTNEDA
AAPDDALAAH ELVHKLLDQL KPQDRLVLQL LDLEQKTIAE ISALTGWNTS LVKVRAFRAR
RKLQKLFQDL KRKERS
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