| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4162 |
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| Symbol | |
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| ID | 6208290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5385534 |
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| End bp | 5386952 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641693831 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001821036 |
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| Protein GI | 182415970 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCCG ACGCCGAACT CCTCCGTCGC TACGTTGACG CAAACTCCGA AGCTGCGTTC
CACGAACTGG TGCGGCGTCA CGCCAATCTC GTCTACGCCG CCGCGTTGAG GCAGACCTGC
GGCGACACGC ACCTGGCCGA GGAGGTCGGC CAGCGCGTGT TCACGGCGCT GGCGCGCAAA
GCTGCCGCCC TCACGCGTCA TCCCACGCTG GTGGGCTGGC TGCACCGGAC CACCCGATTC
GCTGCCATCG ACGCCGTCCG CGCCCGGCAG CGGCGGCAAG CCCACGAACG CGAGGCCGAA
ACCATGAACG AGTGTCCGGA TGGAGAACGC GTCGAGTGGG AGAGGCTGCA GCCGTTGCTC
GACGAGGCGC TGGATGACCT CAACGAGACC GATCGCACCG CGGTGCTGCT GCGCTTCTTT
GAAGGACGGT CCTTCGGCGA GCTCGGCGCG AGTCTCGGGC TCACCGAGAA CGCGGCCCGG
ATGCGCGTCG AGCGGTCGCT GGAAAAGCTG CGCCGCATCC TCGCGCAGCG CGGCTGCACG
TCGACCGCGA GCGCGCTCGG GTTGCTGGTG TCGAGTCACG CGGCACCGGC GGCGCCAGAG
GCATGGGTTG TGACCCTAGC TCCCCAAGCG CTCGCCTCCG CGGCGAGCGG GGCCGGGGTG
GCTGCGGGCG CATCCCTTTT GGCCATGAAC AAACTAACGA TTGCAGCAAT CACCGGAATC
GCCGCCGCGG GCCTGACCAC CGCGGGGCTC ACGTGGAAGA ACCGCTGGAC GCAGCGCGAG
AATGCGGTAC TGCGCGCGGA CAACGAAGCC CTGCGCCAAC TCAAATCCAC CCATGAGGCG
ACGGCGACGG GCGACGGGCC GAGCCTGGGG GCCGTCGCGG ACCGCGAGAA GCTCGCGGCG
CTTTCGGCCC GCGTGCAGGA AAACAGTGCG GCGAAAAACG CGGCCACCGC TGCGGCGAAG
AGCCAGAAGC CGGCGTTGCA GAACCGCGGA ATGGGCGCGC CGATGGAGGC GATCGAGACC
TTCGCGTGGG CCTGCTATAC GGGCGACGTC GCGGCGATCG CGAGGCAGAT CCATTTCGAT
GGCGACGGCC GTGCGCGAGC GGAGGCCAAG CTCGCCGAGA TGCCCGAGTT TCTTCGGCGC
CAGTACAAGA CTCCCGAGGA GCTGTATGCC TTCTTTACCG CGGCCGACGC GTTGGTCTAC
CCGCCGCCGT CGGATCCGGC GCTGCTTGAG AAGATCGAGA CCGTGTTCCT GAAATCCGAC
CGGATCGAAA TGCGCGTGCG CGGATCCAGC CGGGGCCGGC AGCAATATCA ATGGACGACG
GACGGCTGGA AAATGGCCTA TCCGGAGCAG GCGGTCGACG ATCTGCCGAA CCAGGTCCTG
CGCGAGAATC CGATGCCGGA GCCGACAGGG TCGTCGTGA
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| Protein sequence | MLADAELLRR YVDANSEAAF HELVRRHANL VYAAALRQTC GDTHLAEEVG QRVFTALARK
AAALTRHPTL VGWLHRTTRF AAIDAVRARQ RRQAHEREAE TMNECPDGER VEWERLQPLL
DEALDDLNET DRTAVLLRFF EGRSFGELGA SLGLTENAAR MRVERSLEKL RRILAQRGCT
STASALGLLV SSHAAPAAPE AWVVTLAPQA LASAASGAGV AAGASLLAMN KLTIAAITGI
AAAGLTTAGL TWKNRWTQRE NAVLRADNEA LRQLKSTHEA TATGDGPSLG AVADREKLAA
LSARVQENSA AKNAATAAAK SQKPALQNRG MGAPMEAIET FAWACYTGDV AAIARQIHFD
GDGRARAEAK LAEMPEFLRR QYKTPEELYA FFTAADALVY PPPSDPALLE KIETVFLKSD
RIEMRVRGSS RGRQQYQWTT DGWKMAYPEQ AVDDLPNQVL RENPMPEPTG SS
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