| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4161 |
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| Symbol | |
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| ID | 6207776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5381572 |
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| End bp | 5385459 |
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| Gene Length | 3888 bp |
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| Protein Length | 1295 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641693830 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001821035 |
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| Protein GI | 182415969 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.086012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGCC TGTTCTCCCT TGTTCGCCGA AACGTCCACC GGACGCTCCG CCTGTGCGGC
GCATTCGCGT TGATGGGCGC GCTCTTGTCC ACGTCGAGAG GCGAAGCCGA CGCCGCGAAC
TCGAACCTGA TCTCGTCCGC GCCAGCCGGC GTGGTCGAAA CCGGCGTTCC GTCGTTCGCC
GTGCTGGGTG CGTATACGAT GGGCCTGAGT ACCCCGCCCA CCGATCTCCA CCTGCTGCCG
GATGGCCAGC TGCTCGCGGT GGCGCAGCGC GAGATCGCAT TCGGCGATGG CGTGCGCTGG
CAGGTTTTCC GTGCAGCCGA CGAGGCCCCC TCCATTTTCG GCCGCATAGC CGTGGATGAC
AGCGGCCAGA TCTATTTTGG CATCCAAGGT GGGATCGCGC GGCTTGACCT CGGCGCAGAC
TCGCGCTGGC GCGCGACCCA AGTGTGCTCG TTGCCGGCGG GCGCGGGAAT GGACGACTCG
ACGATGATCT CGGTCACCCG GGTCGCAGAC GACTGGTATT GGCACGGCGG CAGCGGCGCG
ATCGTCGCGT GGCGGCCCGG CCAGACGCCG ACGCTGGCAG GCACGATCGG CTCGGTGGAG
CAGATCTTCT CCGTCGGCGA GCACATCTTC GTTAGTGAAC AGGCGTCGGG CGGGCTCTAC
CGGATGACAA GTCGTCGCTC GGCGATGGAA CGTGTCGCCG CCGCCGCCCA GTTCGCCTCG
GAAACGGTCA CCTGCGTCGT GCCTTACCGG CCGGGCGTGG TCCTCGTGGG CACGAGCTTC
AACGGGCTAA AGCTTTTCGA CGGCACCACT CTGCAACCGT TCGGAATGCC GGGACTCACC
GGCGGGGGTT TTCGGATCAA CGATCTTTGC GAAACCGCCG ATGGGATGTT CGCGGCCGCG
GTCGACACGG TGGGCGTGGT GTTCTTCGAT CGGCAGGGCC GATTGGTGCA GGTGCTGGAT
CGCTCACTCG ACCACCGGCT CGCCCGTGTG CAGAAGCTCA TCTATGGGCC CGGCGTGCTG
TGGGCGCGGC TCAACGAAGG CTTCGCCCGC ATCGAATTCC CGTCGCCGAT CTCGCGCTTC
GAGCCGCTGC TGGCCAGCAG TCTCGCCTAC GCCCGCCCTT TGCGGCACGA CGGCTGGCTC
TGGCTGCTCG CGGATGGCCA CGCGATGCGC GGCATCTACA ACTCCGTCGG GCGGCTGGAG
CGATTTGAAT CCGACGGCCC GCCCGGGCGC TACGTCTTCG CGCTGTCGTC AGTCGGCGGC
GAGTTGTTCG CGACCAATGA AACAGGCATC TTCCTTCGGC GCGGCCGCAG CTGGGAGCTG
ATTGTCGCCG GCGTGATCAA CGCCCGGGTC ATCACCACGC TCGCGAACGG CCAGCTGCTG
TACGCCGCGC GCGACGAGAT CGGCACGCTC GAAGCCGCCA ACGACGGGTT CGTGGTCCAC
CGCCAGTCCG TGCCGCAGCT CGGCGACGTG TTCAACGCGA TCCAGGACGC CGCCGGCGTG
TTCTGGTTTG AACTCGGCAC CAGCCGTGTC GCCCGGCTCG ACGTGCAGGC TGGCCTCGAC
ATCGCAATTT TAGGTACGCA GGACGGACTC ACCGATGGCT GGGTCGAGGC GTATGTGCTC
GACGGCGTGG CGCGGTTTCA TTTGCCCAAC CACCTCTTCC GGTTCGACGT AGCCACCCAC
CGTTTCGTCG AGGATCGGGA GTTGATCGCC AGGTTCCCGC AGCTCCTCGT GGGCGGCGGC
CGGCCGGTGG TCGATGGTTT GGGCCGCATG TGGTTTACCG TCGACGGCAG CGCGCACGTG
CTCGACACCC GCGCGGTCGG CGCCGCCCGC GTGCCGCGGG CGATCCCGGT GGGATTCGCG
CCGAGCGATT ACGTCGTCGA AACCGACGGT GTCGCCTGGA TGTTCCTGAA TCGCCGGCTG
GCGCGGGTCG ATCTCCGCGT CGCCCCGCCG TCCGAGCCGC CCCTGCGCGC ACTCGTGACC
TCCGTGCAGT TCCCCGTTAC GAACCGCAGT CTGTTTCAAC CCGGCGCCAC GCTGGCGCCG
CTCGACTACA CCGACAGCTC GCTCGTGTTT CATTTCGTCG CGCCGGCGAA CCCGTTCGGT
CCCGCGCTGC AATTCGAAGT GTTGCTGGAG GGCGCCGAGA ACCAGTGGAG ATCGACCGGC
AACATCGGCT CCGCCGCGTT TAGTCAGCTC AAGGCCGGCA ACTACGTGTT TCGCGTGCGG
CCCGTGCGCG CGGGTCGGGC CACGGGCGAG GAGGCACGCG TTGCCTTCAC GATCAAGCCC
CCCTGGTTCC GCACGCCGCT CGCGTGGACC CTCTACGGTG TCACCGGCCT GGGACTGCTG
GGCTTTTCGA TCTGGCTCCC CGCGTTTCTG CAACGGCGCG AGAACGAGCG GCTGGAACGG
CTGGTCGCGG TGCGCACCGA GGAGCTGAAT ACGAGCAACC AGCAGCTCGG CCAACAAATC
CAGGAGACCA CTGAAAAATC GAAGGCGCTC GCCGCCAGCG AAGAACGGTA TCGCCAGCTC
GCCGTCGAGC TCGAGCATCG CGTCGAAGCC CGCACCGCCG AACTTTCGCA CTCCAATGCC
GAACTGCAGC AACGCGAATC GCTGTTCCGG CTCATGTTCG AGCACGCACC CGTCGGCATC
GCCTGGAAAC GCGCCGATCT GGGCAACGAA TACCATTTCA ACCCGACTTT CCGCCGAATC
CTGCAGCTGC CCGTTTACGC TCCGGCCCAG CTGCCGCTGA TCGAAGAGCT CGCCCACCCC
GACGACCTTC CCGCCCTCTC GCGCGCGATG CGGGCGATCC AAGCGGGCCA GGCCGACAGC
TTCACCATCG AGCCCCGTTT CGTCGTCGCC GGCAGCCAGA CCGTGTGGAC CTCGCTTTCC
GTGGCGGTGG TGCGTGGCTC CGACGCCGCC ATCGTTCAGG TCATCAGCAT CCTCGAGGAC
ATCACCCCGC GAAAGAAGGC GGAACAGGAA CTCGCCACGA CCTACAAGAA CCTGGTCGAT
GCGTCCCGGA TGGCAGGCAT GGCGGAAGTG GCGACAGGCG TGCTCCACAA CGTCGGCAAC
GTGCTTAACA GCCTCAACGT CTCCACGAAC CTCGTCGCCA ACGGCATCCG CCAGGCAAAG
GTCGACACCA TCGTGAAGCT GTCCGCGATG CTCAACGAAC AGGCGGATCA TCTCGGCGAG
TTTCTCACGC AGGATCCAAA GGGCCGGCTC GTGCCAGAGA TGCTCGCGAA GCTGGCGCAG
CACTCGGTGG CTGAGCGCGA CTGGCTCGCG AAGGAAATTT CGTCGATGCA GAAGCACATC
GACCACATCA AGGACATCGT CGCCATGCAG CAGAGCTACG CCACGGTGAT CGGCGTGGTG
GAAAGCCTGG ATGCTTCCAC GCTCTTCGAG GATGCGCTGC GCATGAACAC CGCGGCGCTC
ATGCGCCATG ATGTGACCGT TGTCCGCGAG TATCTGCCCG CCCCCAAGGT CAGCGTGGAA
AAAGGCAAGG TTCTGCAGAT CTTGATCAAT CTCATCCGCA ACGCCAAATA CGCCTGCGAC
GACGCGCAGC TGCCGGAAGG CACGCAAAAG ATCATGACGG TGCGCATCGA GCCGGGCGAG
AACGGCCGCG TGCGGTTGAT CGTGCGCGAC AACGGCGTCG GCATCGCCCC GGAAAATCTC
ACGCGCATCT TCGCGCACGG GTTCACGACG CGGTCCTACG GCCACGGGTT CGGACTGCAC
TCCAGCGCGA TCTCAGCCAA GGAAATGCAG GGCTCGCTCA CCGCTTACAG CGAGGGTCTC
GGCCGCGGCG CGACGTTCGT GCTCGAGATC CCCACCGAAC CGTCAGCACC CGCAACTGGC
ACGCGCAACC CGAAAACAGT CCTGAGTGCG CCTTCCCCCG CCGTCTGA
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| Protein sequence | MARLFSLVRR NVHRTLRLCG AFALMGALLS TSRGEADAAN SNLISSAPAG VVETGVPSFA
VLGAYTMGLS TPPTDLHLLP DGQLLAVAQR EIAFGDGVRW QVFRAADEAP SIFGRIAVDD
SGQIYFGIQG GIARLDLGAD SRWRATQVCS LPAGAGMDDS TMISVTRVAD DWYWHGGSGA
IVAWRPGQTP TLAGTIGSVE QIFSVGEHIF VSEQASGGLY RMTSRRSAME RVAAAAQFAS
ETVTCVVPYR PGVVLVGTSF NGLKLFDGTT LQPFGMPGLT GGGFRINDLC ETADGMFAAA
VDTVGVVFFD RQGRLVQVLD RSLDHRLARV QKLIYGPGVL WARLNEGFAR IEFPSPISRF
EPLLASSLAY ARPLRHDGWL WLLADGHAMR GIYNSVGRLE RFESDGPPGR YVFALSSVGG
ELFATNETGI FLRRGRSWEL IVAGVINARV ITTLANGQLL YAARDEIGTL EAANDGFVVH
RQSVPQLGDV FNAIQDAAGV FWFELGTSRV ARLDVQAGLD IAILGTQDGL TDGWVEAYVL
DGVARFHLPN HLFRFDVATH RFVEDRELIA RFPQLLVGGG RPVVDGLGRM WFTVDGSAHV
LDTRAVGAAR VPRAIPVGFA PSDYVVETDG VAWMFLNRRL ARVDLRVAPP SEPPLRALVT
SVQFPVTNRS LFQPGATLAP LDYTDSSLVF HFVAPANPFG PALQFEVLLE GAENQWRSTG
NIGSAAFSQL KAGNYVFRVR PVRAGRATGE EARVAFTIKP PWFRTPLAWT LYGVTGLGLL
GFSIWLPAFL QRRENERLER LVAVRTEELN TSNQQLGQQI QETTEKSKAL AASEERYRQL
AVELEHRVEA RTAELSHSNA ELQQRESLFR LMFEHAPVGI AWKRADLGNE YHFNPTFRRI
LQLPVYAPAQ LPLIEELAHP DDLPALSRAM RAIQAGQADS FTIEPRFVVA GSQTVWTSLS
VAVVRGSDAA IVQVISILED ITPRKKAEQE LATTYKNLVD ASRMAGMAEV ATGVLHNVGN
VLNSLNVSTN LVANGIRQAK VDTIVKLSAM LNEQADHLGE FLTQDPKGRL VPEMLAKLAQ
HSVAERDWLA KEISSMQKHI DHIKDIVAMQ QSYATVIGVV ESLDASTLFE DALRMNTAAL
MRHDVTVVRE YLPAPKVSVE KGKVLQILIN LIRNAKYACD DAQLPEGTQK IMTVRIEPGE
NGRVRLIVRD NGVGIAPENL TRIFAHGFTT RSYGHGFGLH SSAISAKEMQ GSLTAYSEGL
GRGATFVLEI PTEPSAPATG TRNPKTVLSA PSPAV
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