Gene Oter_4158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4158 
Symbol 
ID6204815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5374407 
End bp5376413 
Gene Length2007 bp 
Protein Length668 aa 
Translation table11 
GC content65% 
IMG OID641693827 
ProductUvrD/REP helicase 
Protein accessionYP_001821032 
Protein GI182415966 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.140406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATTT CCCTCGACTC ACGCGCCCCC GAGCAGATTC CGCCGATCGA CTTCCGCGCC 
CAGCTCAACG ACGAGCAGTT CGCAGCCGTG ACGGCGGAGC CTGGTCCGCT GCTCGTGCTC
GCGGGCGCCG GCTCCGGCAA GACGCGCACG CTCACCTACC GCGTCGCCTA CCTGCTGTCA
CGCGGCGTGA AGCCGGGTGA GATCCTGCTG CTCACGTTCA CCAACAAGGC GGCGAAGGAA
ATGCTCCACC GCGTGCAGGA TCTCACCGGG ATCGAGCCGC AGCGGTTCTG GGGCGGCACG
TTTCACTCGC TCGGCCACCG CGCCCTGCGG ATCTATGGCG ACGCGATCGG GCTGCCGAAA
AATTTCACCA TTCTCGACGC GGACGAATCC GAATCGCTCC TGAAACAGGC GGTCGAGCAC
GAGGACAAGC TCTTCTTCAA GGACAAGACC AACCCGCGGC CGGGCCCGTT GTTCGACGTG
CTCTCGCTCG CGCGCAACAC GCAGCAGCCG CTCGCCGACA CGGTCGCGAA AAACTTTCCG
CAATACACCG AAATCGCGCA CCGGTTTCCG GCGTTCGCCA CCGCGTATGC GACAAGGAAA
CGCGAACAGA ACGTCGTCGA CTACGACGAT CTGCTCGAGT TCTGGCTCGA GCTGCTGATC
AAGGCGCCGG AGGTGGCGCA GTATTTCGCG CACCGGTTTC GCCACGTGCT GGTCGACGAG
TATCAGGACA CCAACACCCT GCAGGCGCAG ATCGTCGACC GGCTGGCGGC GCACCACTGC
GTGATGGCGG TCGGCGATGA CGCCCAGTGC ATCTACTCGT GGCGCGGCGC AAATTTCGAA
AACATCATGA CGTTCCCGGA CCGGCATCCG GGCACGGCCA TTCACCGGAT CGAGACGAAC
TACCGCTCGA CGCCGGAGAT CCTCAACTTC GCCAACGGCG TGCTGCTCGC GCAGCCGAAG
GGCCGGCACT TCGACAAGGA ACTGCGCGCC GCGCGCGGGC ACGCGCAAAA GCCGTTCGTC
GTGCAGGCGA TGGACGACCG CGAGCAGGCC GAGTTCATCC TCAAGCGCAT CCGCGCGCTG
GTGGAGGACG AGGGCGTGTC GCTCAACGAA GTCGCGATCC TCTATCGTTC GCACTTCCTC
GCGCTCGAGG TGCAGCTCGC GCTGTCGCGC GCCGGCGTGC CTTATCAGAT CACGAGCGGC
GTGAAATTTT TCGAGCGGCA GCACATCCGC GATCTCGTCG CGCTGCTGCG CTTCGTCTAC
AACGGGGCGG ACACGCAGGC GTGGCAGCGG ATCGCGGTGC TCCTCCCGAA GATCGGCGAA
AAAGGCGCGC AGAAGATCTA CGCCGCCGCG GTCGACCACG CGCGGCTGAC GCAGAAAAAC
CTGCTCGACG TGCTGAACAC CGACGACGTG CGCAGCAAGG TCGCCAAGGA TGCGCGCGAC
GACTGGGCCA GCTTTTGTGC CTCGCTCAGC GAGGTCGCGG AAAAGATGCA GCATGCGAGG
CCGGCCGACG CGGTCGCGAC CGCGATCGAG GGCTGGTATG GCGACTACCT GAAGGGGCAG
TATGCCGACT ATCTCGACCG GCTCGACGAG TTGAAGGCGC TGGTGGGTTT CGCTCAGAGG
TTCGAGGAGA CGCAGGATTT CCTCGCGCAG ATCGTGCTGC TGAACAGCGA GACGAGCGAC
CGTCACGTCG ATCCCGAGGC GGAGGCGGTC CGGCTCACGA CGGTGCACCA GGCGAAGGGC
CTCGAATACG ACGTGGTTTT CGTGATCGGT CTCGCCGACG GCCAGTTCCC CGGGCGTCGC
TCCATCGAGT CGGGCGACGT GGAGGAGGAA CGCCGGCTGT TCTATGTCGC CGTGACACGC
GCACGGAACG AGCTCTATCT TTCGTATCCG AAGGTCGCGA CCCGCGGTGG TCCCGGCGGC
ATGCTGCTCA CGCCGAGCCG TTTCCTCCTC GAGGTACCGA CCGATCTCTA CGAGCCGCTG
CGGATCAAGC GCAGCTACGG ATGGTGA
 
Protein sequence
MEISLDSRAP EQIPPIDFRA QLNDEQFAAV TAEPGPLLVL AGAGSGKTRT LTYRVAYLLS 
RGVKPGEILL LTFTNKAAKE MLHRVQDLTG IEPQRFWGGT FHSLGHRALR IYGDAIGLPK
NFTILDADES ESLLKQAVEH EDKLFFKDKT NPRPGPLFDV LSLARNTQQP LADTVAKNFP
QYTEIAHRFP AFATAYATRK REQNVVDYDD LLEFWLELLI KAPEVAQYFA HRFRHVLVDE
YQDTNTLQAQ IVDRLAAHHC VMAVGDDAQC IYSWRGANFE NIMTFPDRHP GTAIHRIETN
YRSTPEILNF ANGVLLAQPK GRHFDKELRA ARGHAQKPFV VQAMDDREQA EFILKRIRAL
VEDEGVSLNE VAILYRSHFL ALEVQLALSR AGVPYQITSG VKFFERQHIR DLVALLRFVY
NGADTQAWQR IAVLLPKIGE KGAQKIYAAA VDHARLTQKN LLDVLNTDDV RSKVAKDARD
DWASFCASLS EVAEKMQHAR PADAVATAIE GWYGDYLKGQ YADYLDRLDE LKALVGFAQR
FEETQDFLAQ IVLLNSETSD RHVDPEAEAV RLTTVHQAKG LEYDVVFVIG LADGQFPGRR
SIESGDVEEE RRLFYVAVTR ARNELYLSYP KVATRGGPGG MLLTPSRFLL EVPTDLYEPL
RIKRSYGW